Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0434 |
Symbol | |
ID | 6331045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 445953 |
End bp | 447293 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642656725 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001930631 |
Protein GI | 188996380 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000104713 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGATATA TAAAAACAGA TTTAACTTGT AGGCTTGATA ACCTTCCATG GACTTGGTTT CATACTAAGT TTGTTATGGC TCTTGGCATA ACCTGGATAT TAGATGCTTT TGAAGTTGTA ATCGTAAGCG TAGTTTTAAA GTCTATGGCT AAATCTTTAA ATCTATCTGT TTTTCAATCA TCTTGGCTTG TTAGCAGTTT TTTAATTGGT GCTTTGGTTG GAGCGTTTAT TTTTGGTTAT TTAGCTGATA AGTTCGGAAG AAAGAAAATA TTTTTCATAA CACTACTTTT ATACTCTCTT GGAACATTTT TAACAGGCTT TGCTAACTCT TTTGAAATTG CATTGCTTTT AAGATTTATC ACAGGATTTG GACTTGGTGG CGAGTTTTCT GCTATCCATT CAGCGATAGA TGAGTTTATT CCATCAAGAT TTAGGGGAAG AGTTGATGGT TTTATAACTG CATCATGGAA TCTTGGAAGT ATTTTTGCTT CTTTGGTTGG GATGTATCTA CTGTCTTCAT TTCCTGAAGA AAAAGCTTGG CGGTATGCGT TTTTATTTGG CGGTAGTTTA GCACTATTGA TAGTATTTAT AAGATTTTTC ATTCCAGAAT CTCCAAGATG GCTAATATCG AAAGGACTAA TAGAAAGAGC CGAAGAGATT GTATCTGAAT TAGAAAAGAA ATATCATGCA AAGCCAATAA ACAAACAGTG CGAAATTCCT GTATTTGAGG GTAGTTTATT AGATGCGGTG AAGATTATTC TCAAAAAGTA CAGAGGAAGG TTTTTATTTG GAACGGCTAT GAGTTTTACA ATTTTGACAA CATACTATGG CTTTATTACT ATCTTACCTT TGGTAATTAC AAATCAGTAT AATCTTCCTA CAAAAGAAAT TCCAAATCTT TTACTAACTG CAAGCATTGG TGGTTTAATC GGTGGTATAG TTGTATCTTT TTTATCTGAC AAGCTTGGTA GAAAAATAAC AGGAACGACT GTAGCTTTAT TTTCTCTCTT AACATCTTTT TTCTTTTTAA CATCGCAGGA TATTTATACT ACAGTTTTTG TTTATTCATT GGTTGCATAC TCTTTTGCAA GCGTTGCTTA TGTATCTGCG ATGGAGGTTT ATCCTTCTTA TTTGAGGGCT ACAGCTATCG GTGTTTTATC TGTCATTGGA AGAATCTCAG GAATGCTGGC TCCACCAATA CTAACCTATC TTGCAACTAT AGATTATAAA TTAAGTGTAT TAGGTTTAAG TTTGCTGTGG CTTATAGGTT TTATAGGATT TTTTATATGG TCTAAATTTG GCGTTGAAGC AAAAGGAAAA TCTATTGAGG ATATAACTTA A
|
Protein sequence | MRYIKTDLTC RLDNLPWTWF HTKFVMALGI TWILDAFEVV IVSVVLKSMA KSLNLSVFQS SWLVSSFLIG ALVGAFIFGY LADKFGRKKI FFITLLLYSL GTFLTGFANS FEIALLLRFI TGFGLGGEFS AIHSAIDEFI PSRFRGRVDG FITASWNLGS IFASLVGMYL LSSFPEEKAW RYAFLFGGSL ALLIVFIRFF IPESPRWLIS KGLIERAEEI VSELEKKYHA KPINKQCEIP VFEGSLLDAV KIILKKYRGR FLFGTAMSFT ILTTYYGFIT ILPLVITNQY NLPTKEIPNL LLTASIGGLI GGIVVSFLSD KLGRKITGTT VALFSLLTSF FFLTSQDIYT TVFVYSLVAY SFASVAYVSA MEVYPSYLRA TAIGVLSVIG RISGMLAPPI LTYLATIDYK LSVLGLSLLW LIGFIGFFIW SKFGVEAKGK SIEDIT
|
| |