Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0055 |
Symbol | |
ID | 6331786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 64711 |
End bp | 65481 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642656336 |
Product | nitrate ABC transporter, inner membrane subunit |
Protein accession | YP_001930258 |
Protein GI | 188996007 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | [TIGR01183] nitrate ABC transporter, permease protein |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGTTT CAAAGCTCAT TCAAAATTTA GTTTTTGCAG TAGTTGGATT TACAATTTTT CTTTTTTTAT GGTGGACAAT TACTTATTTC TTTGTAAAGG ACCTTCCGCA ACCTCAAGAA GTCTTAAAAA CTTTATTTGA TTTACTTAAA AATCCTTTTT ATGATAACGG ACCAAATGAC AAAGGGATAG GATGGCAACT CTACTATTCT TTAAAAAGGG TCATTTTGGG ATTTCTTATA GGTAGTTTAA TTGGGATTCC TGTTGGTTTT ATTTTAGGTG TGTTTGGTAG ATTAAATGCC ATGTTTAATT CGTTAATTCA AATTTTAAGA CCAGTATCTC CTTTGGCTTG GTTCCCGATA GGTCTTGCAT TATTCCAAAA CTCTGAAAAA GCATCAATTT TTACTATAGC CATAACTTCA ATATGGCCAA CTCTAATAAA TACAGCATAC GGAGCATCTA CTATACCACA AGATTTTAAA AATGTATCAA AAGTTTTCGG ATTTTCCATA CTAAACTATT TTAGGTATGT AGTTGTTCCT TATACATTTT CTTTTACACT TACTGGTTTA AAGATAAGTA TAGGTATTGC ATGGATGGTA ATTGTAGCTT CTGAGATGCT AGCTGGGGGA ACAGGAATTG GCTTTTACAT ATGGGACTCT TGGAATGCTT TAAACCTTCG TAATGTAATG TCTGCAATTA TTTTGATAGG AGTTATAGGT TATATTCTTG ATTACAGTTT CAGCTACCTG CAAAGGAGGT TCCAAAGATG A
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Protein sequence | MKVSKLIQNL VFAVVGFTIF LFLWWTITYF FVKDLPQPQE VLKTLFDLLK NPFYDNGPND KGIGWQLYYS LKRVILGFLI GSLIGIPVGF ILGVFGRLNA MFNSLIQILR PVSPLAWFPI GLALFQNSEK ASIFTIAITS IWPTLINTAY GASTIPQDFK NVSKVFGFSI LNYFRYVVVP YTFSFTLTGL KISIGIAWMV IVASEMLAGG TGIGFYIWDS WNALNLRNVM SAIILIGVIG YILDYSFSYL QRRFQR
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