| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1833 |
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| Symbol | |
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| ID | 6312722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 1971200 |
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| End bp | 1972051 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 642650556 |
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| Product | squalene synthase HpnD |
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| Protein accession | YP_001924531 |
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| Protein GI | 188581086 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCA CCGCTAGCCC GATGCCGGGC GAGACCCCAG AAGCGCCCGC CCTGCCGGCC
GCCGGCTCGT CCTTCTACAC GGCGATGCGC CTGCTCCCGA AGGAGCGGCG CGAGGCGATG
TACGCCGTCT ACGCCTTCTG CCGCTCCGTC GACGACGTCG CCGATGACGG CGGCGCGCGG
GAGGTCCGGG CGGCCGAACT CGACCGCTGG CGCGCCGATA TCGACGCGCT CTATGCCGGC
AATCCGCCGC CGCGGGTAAA GCCGCTCGAA GAGCCGATGC GCCGGTTCGG GCTCAAGCGC
GAGGACTTCC AGGCGGTCAT CGACGGCATG GCGATGGACG CCGAGGAGGA CATCGTCGCC
CCCTCGGAGG CCAAGCTCGA TCTCTACTGC GACCGGGTCG CGAGCGCCGT CGGGCGGCTG
TCGGTGCGCA TCTTCGGCAT GCCGGAGGGG GACGGGATCC GGCTGGCATG GCACCAGGGC
CGGGCGCTGC AGCTCACCAA CATCCTGCGC GACATCGACG AGGACGCGGA GCGCGGGCGC
CTCTACCTGC CGATGGAGAA GTTCCACAAG ATCGGGCTGA TGAACCCGAC GCCGGAGACG
GCCCTGGCGC ATCCGCGCCT CGGCGAGGTC TGCCGGGCGG TCGCGGCGGA AGCGGAGGAG
CATTACCGCC AGACCTGGGC CATCATCGAG CGCAGCCCGC GGCAGGCCAC CAAGGCCGCC
CGCCTGATGG CGGCGGCCTA CCGGCTCTAC CTCGACGCCG TGGTCAAGCG CGGCTGGGCG
GCCCCGCGGG CGCGGGTGAA GCCCGGAAAG CTCTCCCTCC TCCGCGTCGC CCTGCGCCAC
GGGATTTTCT GA
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| Protein sequence | MSATASPMPG ETPEAPALPA AGSSFYTAMR LLPKERREAM YAVYAFCRSV DDVADDGGAR
EVRAAELDRW RADIDALYAG NPPPRVKPLE EPMRRFGLKR EDFQAVIDGM AMDAEEDIVA
PSEAKLDLYC DRVASAVGRL SVRIFGMPEG DGIRLAWHQG RALQLTNILR DIDEDAERGR
LYLPMEKFHK IGLMNPTPET ALAHPRLGEV CRAVAAEAEE HYRQTWAIIE RSPRQATKAA
RLMAAAYRLY LDAVVKRGWA APRARVKPGK LSLLRVALRH GIF
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