| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1991 |
|---|
| Symbol | |
|---|
| ID | 6315905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | - |
|---|
| Start bp | 2097233 |
|---|
| End bp | 2098705 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642644378 |
|---|
| Product | restriction modification system DNA specificity domain |
|---|
| Protein accession | YP_001918146 |
|---|
| Protein GI | 188586601 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0732] Restriction endonuclease S subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.120232 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.112136 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATA AGAAGAGCAA AAGAATAGAA GAATTATTAG AAGAAACTAT TGTTCATGAA
GACGAAGAAC CTTATGAACT GCCTAATAAC TGGGCTTGGG TTGCATTAGA CATACTAGCA
GAAGAAATTA AAAATGGAAC TACAATAAAA CAAAGCAAGA CCAAACCTGG GATACCTGTC
ACGAGGATAG AATCAATTCA AAACAACGAA ATACAACTGG ATAGAGTTAG ATATATAAGG
GATTTAGATA AAATCAAAAA TAATGATTAT TATAAAATTG GAGATATTGT TTTAAGCCAT
ATAAATAGCA TTGAACATGT AGGTAAAACT GCTTTGATTA AGGAAGATTA TCTACCTTTA
ATACATGGAA TGAATTTATT AAGAATTAGA GTAAATAATA ATATGATTCT GCCTCAGTTT
CTCCAATTAT ACACGAGGTC CTATAATTTT AGAAAAGCTG TATTGAAAAG AATTAAAATG
GCAGTCAATC AAGTTAGCTT AAATCAAAAA AATTTGAAGC AAATAAGTAT ACCAATAGCA
CCGAAAAATG AACAAAGAAG AATAGTTTAT AAAGTTGATC GCCTTTTAAG TAAAATTAAT
AAAGCAAAAG AATTAATAGG AGAAGCTAAA GAAACTTTTG AACTACGTCG TGCAGCTATA
TTAGATAAGG CTTTTAAAGG GGAATTGACG TGGCGTGAGG AAAATCCGAG AGTTGAGTCA
GTAGATACTT TGCTAGCTAA AATAAATTCT GAGAAGAAAA CTGATATTAA AAAAAGCCCC
AATGGTTTAT ATGAACTTCC GGATAATTGG TGTTGGATTG ATTTAGGGGA ACTAATTTGT
CATTCTTCGT ATGGAACATC TGCAAAGGCT TATAAAGATA TAAATGGTTT ACCTGTTCTT
AGGATGGGTA ATATTAAATT AACTGGAAGT ATTGATTTAA ATGATCTAAA ATACCTTCCT
TTTGATCACA AAGATGTAGA AAAATATAAA CTAGAAGAAT ATGATTTATT GTTTAACAGA
ACAAATAGTT ATGAGCTAGT TGGAAAATCG GCAATTGTTG AGCCAGAACA TGCTGGAAAA
TTTACGTATG CTTCATATTT GATAAAGATC TCGCTATTTT ACAAAAAGAT TTTAGCACCA
TATATTTGTT ATTATATTAA TAGTCATATT GGACGAAAAT ATCTACTATC TACAGTTAAA
CAACAAGTAG GACAGGCTAA TATCAATTCA AAGAAACTAT CATCATTACC AGTACCACTA
CCTCCTGAAG AAGAAATTAA GGAAATTAAT AGAATCATGA AGAAAGTAAG TGCAAAGGAG
AATAGAATAC AAAACTTATT AAATTTGGGA ACCTATGTTG CTGAACTAGA ACAATCTATT
CTTTCTAAAG CCTTTCGTGG AGAGTTAAAT ACTAATGATC CTAAAGATGA AAGTGCAATT
GAATTATTAA AAGAAGTTTT AAAAGATAAA TAG
|
|---|
| Protein sequence | MTDKKSKRIE ELLEETIVHE DEEPYELPNN WAWVALDILA EEIKNGTTIK QSKTKPGIPV
TRIESIQNNE IQLDRVRYIR DLDKIKNNDY YKIGDIVLSH INSIEHVGKT ALIKEDYLPL
IHGMNLLRIR VNNNMILPQF LQLYTRSYNF RKAVLKRIKM AVNQVSLNQK NLKQISIPIA
PKNEQRRIVY KVDRLLSKIN KAKELIGEAK ETFELRRAAI LDKAFKGELT WREENPRVES
VDTLLAKINS EKKTDIKKSP NGLYELPDNW CWIDLGELIC HSSYGTSAKA YKDINGLPVL
RMGNIKLTGS IDLNDLKYLP FDHKDVEKYK LEEYDLLFNR TNSYELVGKS AIVEPEHAGK
FTYASYLIKI SLFYKKILAP YICYYINSHI GRKYLLSTVK QQVGQANINS KKLSSLPVPL
PPEEEIKEIN RIMKKVSAKE NRIQNLLNLG TYVAELEQSI LSKAFRGELN TNDPKDESAI
ELLKEVLKDK
|
|---|
| |