Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0117 |
Symbol | |
ID | 6314659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 134047 |
End bp | 135516 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642642490 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_001916304 |
Protein GI | 188584759 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000338438 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.00843463 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGAAAG ATCATGAATT GATCAATGTC AGGTACGAAA AAGCCCGCGA CATGGAAAAT CGCAACATCC AACCTTTTGG CGACAAATAT TCTGCCACTT ACTATGCTCA AGAAGTTAAA GATAACTATG AACAATTGTT AGAAACTAAA GAAGAAGTTA GCTTATCAGG ACGTATTATG GCCAAGCGAG GCCATGGCAA AGCAGGATTT GCCCATATCC AAGACTCTAG TGGACAAGTG CAGATTTATA CACGAGTTGA TAATGTTGGG GAAGAAGACT ACGAATTGTA TAAAGAACTG GATATTGGAG ATATTATTGC TTTAAAAGGG CCAGTTTTTA TGACTAGAAA AGGTGAAATT ACTGTTGAGG TCAAAGAATT TCACCTCCAA AGTAAGTCTT TACGTCCTCT ACCTGAAAAA TGGCATGGAT TGAAAGATGT AGACCTGCGC TACCGTAAAC GATACTTAGA TCTGATCATG AATCAAGATG TTAAAGATAC TTTTGTAATT AGAAGTAAGA TAATCCGAGA AATGCGAAGA TATTTGGATG ATAGAGGTTT TTTTGAAATG GAAACCCCCA CCCTACATAC AATTCCAGGT GGTGCAAATG CTAGACCATT TAAAACATAT CACAACGCTT TAGAAATGAA ACTTTATATG AGAATAGCAA CTGAATTACA CTTGAAGAGG CTAATTGTTG GTGGATTTGA TAAAGTTTAC GAATTAGGTA GAATTTTTAG GAATGAAGGA ATATCAACTA AACATAATCC TGAATTTACC TCAATTGAAC TATATCAATC TAATAGTGAT TACCATGACA TGATGGAGCT TACTGAAAAT ATGATTTATG AAATCGCAAA CAAAATTTTT GGAACCCCAG TGGTTGAATA TCAGGGGACA AATATTGACT TCACTCCACC ATGGCCTAGA AAAACAATGA TTGATGCCGT GAAAGAGGCT ACAGGAATTG ATTTTTCCGA GCTAAATCAT GAAAAAGCCA GAGAAAAAGC CGAACAAGCG GGAATAGAAG TCGAGAAAGA TGCCACATGG GGTGAAGCCT TAAACGAAAT TTTTGAGGAA AAGGTAGAAG ATAGTTTGGT TCAACCCACC TTCATTCTAG ACTATCCTGT TGAAGTTTCA CCTTTGGCAA AAAGGCATGA AGAAGATAGT CGCTTAACTT ACAGATTTGA AGGATTCCTG TGGGGAAGTG AAATAGCAAA TGCTTTTACA GAACTTAATG ACCCTAGAGA TCAAAGGGAA CGATTTGAAA GTCAAGTGGA AAAACGTGAT GCGGGTGACG AGGAAGCTCA TATGATGGAT GAAGATTTTG TTGAAGCTTT AGAATATGGT ATGCCTCCCA CAGGTGGCCT TGGGATTGGA ATAGATAGAT TAGTAATGTT TATGACAAAC TCTACATCTA TAAGAGATGT AATTTTATTC CCTACAATGA GGCCAAAGCA GGATGAATAA
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Protein sequence | MEKDHELINV RYEKARDMEN RNIQPFGDKY SATYYAQEVK DNYEQLLETK EEVSLSGRIM AKRGHGKAGF AHIQDSSGQV QIYTRVDNVG EEDYELYKEL DIGDIIALKG PVFMTRKGEI TVEVKEFHLQ SKSLRPLPEK WHGLKDVDLR YRKRYLDLIM NQDVKDTFVI RSKIIREMRR YLDDRGFFEM ETPTLHTIPG GANARPFKTY HNALEMKLYM RIATELHLKR LIVGGFDKVY ELGRIFRNEG ISTKHNPEFT SIELYQSNSD YHDMMELTEN MIYEIANKIF GTPVVEYQGT NIDFTPPWPR KTMIDAVKEA TGIDFSELNH EKAREKAEQA GIEVEKDATW GEALNEIFEE KVEDSLVQPT FILDYPVEVS PLAKRHEEDS RLTYRFEGFL WGSEIANAFT ELNDPRDQRE RFESQVEKRD AGDEEAHMMD EDFVEALEYG MPPTGGLGIG IDRLVMFMTN STSIRDVILF PTMRPKQDE
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