| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04865 |
|---|
| Symbol | |
|---|
| ID | 6305029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 1514232 |
|---|
| End bp | 1516667 |
|---|
| Gene Length | 2436 bp |
|---|
| Protein Length | 811 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642638802 |
|---|
| Product | TonB-dependent outer membrane Receptor |
|---|
| Protein accession | YP_001912679 |
|---|
| Protein GI | 188575750 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGTC CCACCCTTTC GATGATTGGC CTGGCCGTCG CCGCCGCGCT CAGCGCCCAA
GCGCAAGCCC AACAGGCCGA TACGGCCTCC AACACCCTGG ACACCGTAAT CGTCACCGGC
ACCCGGGCCA GCGGCCGCAC CGTGCTGGAA TCGACCGTGC CGGTGGACGT GCTCACCGCC
GAAGACATCC GCAAGGCCGG TGTGGTCAAC GGCGAGCTTG GCAGCGCGCT GCAGGCGCTG
CTGCCGTCCT TCAACTTCCC GCATCAATCC AACTCTGGCG GCGGCGACCA TATCCGCGCC
GCGCAGCTGC GCGGGCTCTC GCCCGATCAA GTGCTGGTGC TGGTCAACGG CAAGCGCCGC
CACACCTCGT CACTGGTCAA TATCGACAGC AAGATCGGCA AGGGCACCAC GCCGGTGGAT
TTCAATTCCA TCCCGATCAA CGCGATCAAG CGCATCGAAG TGCTGCGCGA CGGTGCCGGC
GCGCAGTACG GCTCGGATGC GGTTGCCGGC GTCATCAACG TCATCCTGGA CGACAACCCC
GAGAGCGGCG AACTGGAAGC AAGCTTCGGC GCCTACAACA CCGATGTCGC GCCGATCAAT
CGCCGCATCA CCGATGGCCA GACCAGCTAC GCCAGCGCCA AGGTCGGCAC GCTGCTGGGC
GACGACGGCG GCTTCTTCAA GGTGGGCCTG GAACTGAAGA ATCGCGAAGC CACCAACCGC
GCCGGCTTCG ACCAGATTCC GCCGTTCGAA GAGCAGACCC CGGCCAATCT GGCGCTCAAG
GGGCAGCGCA ATTACGTGCT CGGCGATGGG GCCACCAAGG GCCTGAATGC CTGGCTCAAT
ACCAAAATTC CGTTCAGCGC CAGCGGCGAG TTCTACGCGT TCGGCACCTA CGACCAGCGC
GATTCCGAAG GTGCCAATTA CTTCCGTTAC CCAGACAGCA GCGCCAACTG GCGCGAGATC
TACCCCAACG GCTACCGCCC GATTTCCGAA GGCGAAAATC GCGACCTGCA GATCGTGGCC
GGCGCGCGCG GGCAATGGGG CAACTGGGAT TACGATGCCA GCCTCAACTA TGGCCGCAAC
GACTTCACCT ACCGGCTGCG CAATTCGCTC AATGCATCGC TCGGCCCAGG CAGCACCACG
CGCTTCAAGA CCGGCGATTT CGCCTTCGCG CAAACCGTGG GCAATTTCGA TCTGACCCGA
GTGTTCGACG CCGTTGGTGC CACGCACACC TTCGGCACCG GCGCCGAATT CCGCCGCGAG
CAGTACCGCA CCCATGCCGG CGACCCGGCC AGCTACGCGG CCGGCCCGTT CACCGACCGC
CCCACCGGAT CGCAGGCCGG CGGTGGGCTC ACCCCGCAGG ACGAAGCCGA CCTGTCGCGC
AATGTGGCCA GCGCCTACGC AAACGTATCA AGCCAGTTCG GCGACAAGTT CTCCACAGAT
CTGGCCGGCC GCTACGAGCA TTACCAGGAC TTCGGCAGCC AGTGGACCGG CAAGCTGGCC
GCACGTTACG CGTTCGCCCC GGCCTTTGCG CTGCGTGGCG CCATCTCCAA CAACGTGCGT
GCGCCCTCGC TCAGCCAGAT CGGTTACGAA GCAACCTCCA CCGGTTACGA CGCCGACGGT
CGCCTGACCC AGGGCCGCTT GCTGTCGGTC AACAATCCCA TCGCGCGTGG ACTGGGCGCC
ACCGATCTGA CACCGGAAAA GTCGGTCAAT TACAGCCTCG GTTTCACCAG CAAGCTGGGC
GATCACTTCG ACCTGTCGCT GGACTTTTTC CAAATCGATA TCGACGACCG CATCGCGCTG
TCCGAAAACA TCACCGGCGA CGCGCTCACC AACTTCGTCC AGCAGAACTT CGGCGTCACC
GGCGTGCAGA GCGCCAGCTA TTTCCTCAAT GCTGCCAACA CCCGCACCCG TGGCGCCGAG
CTGGTCGCCA ACTGGCGCCA GCACACCTTC GGCGGCGACC TGCTGCTGAC CGGCACCTAC
AGCTACGCCA AGACCGAACT GAAAGACATC ATCGCCACCC CGTCGCAGTT GCTCGCGTTG
GATCCGGAGT ACGTGCTGTT CGGCGTGGAA GAAAGCAACA CGCTCACCGG CGCAGCGCCG
CGCACGCGTG CAGCGCTCGC CGCCAACTGG AGCAATCAGC ACTGGAATCT GCAGACGCGC
GTCAACCGCT ACGGCAGCGC CACCCGCGTG TTCGATTTCG GCGGCGGCTT CGCACCGCAC
CAGACCTACG GTGCCGAATG GCAGCTGGAT CTGGAAGCCG AATACCACCT GGACACGCAG
TGGACGTTGG CCATCGGCGG TCAGAACATC CTGGACAACT ACCCGGACCG CTCCATCGAC
GACATCGCCT ACTTCGGCAA CCTGCCCTAC GACGTGCTCT CGCCGATCGG CAGCAACGGC
GCGTACTGGT ATGGCCGAGT ACGCTACAGC TTCTGA
|
|---|
| Protein sequence | MTRPTLSMIG LAVAAALSAQ AQAQQADTAS NTLDTVIVTG TRASGRTVLE STVPVDVLTA
EDIRKAGVVN GELGSALQAL LPSFNFPHQS NSGGGDHIRA AQLRGLSPDQ VLVLVNGKRR
HTSSLVNIDS KIGKGTTPVD FNSIPINAIK RIEVLRDGAG AQYGSDAVAG VINVILDDNP
ESGELEASFG AYNTDVAPIN RRITDGQTSY ASAKVGTLLG DDGGFFKVGL ELKNREATNR
AGFDQIPPFE EQTPANLALK GQRNYVLGDG ATKGLNAWLN TKIPFSASGE FYAFGTYDQR
DSEGANYFRY PDSSANWREI YPNGYRPISE GENRDLQIVA GARGQWGNWD YDASLNYGRN
DFTYRLRNSL NASLGPGSTT RFKTGDFAFA QTVGNFDLTR VFDAVGATHT FGTGAEFRRE
QYRTHAGDPA SYAAGPFTDR PTGSQAGGGL TPQDEADLSR NVASAYANVS SQFGDKFSTD
LAGRYEHYQD FGSQWTGKLA ARYAFAPAFA LRGAISNNVR APSLSQIGYE ATSTGYDADG
RLTQGRLLSV NNPIARGLGA TDLTPEKSVN YSLGFTSKLG DHFDLSLDFF QIDIDDRIAL
SENITGDALT NFVQQNFGVT GVQSASYFLN AANTRTRGAE LVANWRQHTF GGDLLLTGTY
SYAKTELKDI IATPSQLLAL DPEYVLFGVE ESNTLTGAAP RTRAALAANW SNQHWNLQTR
VNRYGSATRV FDFGGGFAPH QTYGAEWQLD LEAEYHLDTQ WTLAIGGQNI LDNYPDRSID
DIAYFGNLPY DVLSPIGSNG AYWYGRVRYS F
|
|---|
| |