Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03829 |
Symbol | glyS |
ID | 6303903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 413247 |
End bp | 415484 |
Gene Length | 2238 bp |
Protein Length | 745 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642637692 |
Product | glycyl-tRNA synthetase subunit beta |
Protein accession | YP_001911577 |
Protein GI | 188574648 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGAAC AACTTCCCCT GCTGATCGAA CTGGGCACCG AAGAGCTGCC GGTCAAGGCG CTGCCGGATC TGGCGCAGGC GTTTTTCGAT GGTGTGCTCA GCGGCCTGGA AAAGCGCGGC ATTGCCGTCA CCCGTGGCGC TGCCAAACCG CTGTCCACCC CGCGTCGTCT GGCGGTGCTG CTGCCGGGCG TGGCCACCGA GCAGCCGGAG CAGCGCTCCG AAGTGCTGGG ACCGTATCTC AACATCGCCC TCGACGCCGA AGGCCAACCG ACCAAGGCAT TGGCGGGTTT CGCGGCCAAG GCCGGCATCG ACTGGACCGC GCTGGAGCGC ACCAGCGACG CCAAGGGCGA GCGTTTCGTG CACCGCGCGG TGACCCCGGG CGCGCGTACC GCCGAGCTGT TGCCGGAGAT CCTGCGCGAG GCCATCGCCG CGATGCCGAT TCCCAAGCCG ATGCGCTGGG GTGGGCACGA ATACGCCTTC GCACGGCCGG TGCAGTGGCT TGTGCTGCTG TTCGGCAACG AGGTGATCCC GGCCGAATTG CTGGGCGTGC GTGGCGATCG CATCACGCGC GGCCACCGCT TCATGCATGA GGGCGCGGTC TCGCTGGCGG TGCCGGGCGA CTATGTCGAA GCCTTGCGTG CGGCGCATGT ACTGGTGGAT CCCGATGCGC GCCGCACCCG CATCGTCGAA GAAGTGGAAG CGGCCGCCAA GCAGGCCGGC GGCAGCGCGT GCATCAGCGA CGACAACCTG GAGCAGGTGG TCAACCTGGT CGAATGGCCG TCGGCGGTGC TGTGCAGTTT CGAACGCGAT TTCCTGGCGG TGCCGCAGGA AGCGTTGATC GAAACCATGG AGATCAACCA GAAATTCTTC CCGGTGCTGG ACGACGGCGG CACCTTGACC GAGCAGTTCA TCGGCATCGC CAACATCCAA TCCAAGGACG TGGCCGAAGT CGCCAAGGGC TACGAGCGCG TCATCCGTCC GCGCTTTGCC GACGCCAAGT TCTTCTTCGA CGAAGACCTC AAGCAGGGTC TGCAGGCGAT GGGCGATGGT CTGGCCAGCG TCACCTATCA GGCCAAGCTG GGCACGGTGG CCGACAAGGT CGCACGCGTG GCAGCGCTGG CGGAAGTCAT CGCGCCGCAG GTGGGCGCCG ACCCGCTGCA GGCACGCCGC GCTGCAGAAT TGGCCAAGAA CGACCTGCAA TCGCGCATGG TCAACGAATT CCCGGAATTG CAGGGCATTG CCGGCCGCCA TTACGCCAAG GCCGCCGGTG AGCCCAGCGA GATTGCGCTG GCCATCGACC AGGCCTACCA ACCACGCTTT GCCGGCGACG ACATCGCACT GTCGCCGCTG GGCAAGGTGC TGGCGATTGC CGAACGCCTG GATACCTTGG CCGGTGGATT TGCGGCCGGG TTGAAGCCGA CCGGTAACAA GGATCCGTTT GCGCTGCGGC GCAATGCGTT GGGGTTGGCG CGGACGGTGA TTGAGAGTGG GTTTGATCTG TCCCTAACTG AATTGCTCAA GAAAGCAGTC GGTTTGGTTA ATTCCGCTTT GGCTTGGTCG CAAGCTAGCA AACAACAGAC AGCGGTTGAG GCTGCCAAGG TGCAAGGTGT CCATGTCGCA GAGCGTCAGA GCGGCGGATT ATGGGTGCCA AACGTAGAGG CAACTTCAGC AGAAATCCTC GACTTCATCC TCGACCGCCT ACGCGGCTAT TACGCCGACA AGGGCGTACC GGCTACGCAT TTCAACGCGG TCGCCGCATT GTTCTCCGGC ACGTCCGAAG CCGTGACGGC ACCGACCGGC GTAGGAGCGC ACCCGGGCGC GACCCACGGC TCCCTTTACG ACTTCGACCG CCGCATCGAT GCCATCGGCA TCTTCGCCAC GTTGCCCGAA GCCCAAGCGT TGGCCGCGGC CAACAAGCGC ATCCGCAATA TCCTGCGCAA GGTGGAAGGC GAGATTCCCG GCGACATCGA CACTGCGCTG TTGCGCGAAC CGGCCGAAGA AGCCCTGGCC GAAGCGGTGG AAGCCGCCAT CGGCGCTACC GGCGATGCCT TGCATCGCCA CGACTACGTT GCCGTGCTCG CACGCTTGGC GCGCCTGCGC CCACAAGTGG ATGCGTTCTT CGACGGCGTG ATGGTCAATG CCGAAGACCC GCAGCTGCGT GCCAACCGCC TTGCCCTGCT GAAGAAGCTC GGCGACCGCC TCGGCAGCGT CGCCGCCATC GAGCACTTGT CCAGCTGA
|
Protein sequence | MSEQLPLLIE LGTEELPVKA LPDLAQAFFD GVLSGLEKRG IAVTRGAAKP LSTPRRLAVL LPGVATEQPE QRSEVLGPYL NIALDAEGQP TKALAGFAAK AGIDWTALER TSDAKGERFV HRAVTPGART AELLPEILRE AIAAMPIPKP MRWGGHEYAF ARPVQWLVLL FGNEVIPAEL LGVRGDRITR GHRFMHEGAV SLAVPGDYVE ALRAAHVLVD PDARRTRIVE EVEAAAKQAG GSACISDDNL EQVVNLVEWP SAVLCSFERD FLAVPQEALI ETMEINQKFF PVLDDGGTLT EQFIGIANIQ SKDVAEVAKG YERVIRPRFA DAKFFFDEDL KQGLQAMGDG LASVTYQAKL GTVADKVARV AALAEVIAPQ VGADPLQARR AAELAKNDLQ SRMVNEFPEL QGIAGRHYAK AAGEPSEIAL AIDQAYQPRF AGDDIALSPL GKVLAIAERL DTLAGGFAAG LKPTGNKDPF ALRRNALGLA RTVIESGFDL SLTELLKKAV GLVNSALAWS QASKQQTAVE AAKVQGVHVA ERQSGGLWVP NVEATSAEIL DFILDRLRGY YADKGVPATH FNAVAALFSG TSEAVTAPTG VGAHPGATHG SLYDFDRRID AIGIFATLPE AQALAAANKR IRNILRKVEG EIPGDIDTAL LREPAEEALA EAVEAAIGAT GDALHRHDYV AVLARLARLR PQVDAFFDGV MVNAEDPQLR ANRLALLKKL GDRLGSVAAI EHLSS
|
| |