| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03489 |
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| Symbol | trmE |
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| ID | 6308647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 5233231 |
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| End bp | 5234571 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642642358 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001916183 |
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| Protein GI | 188579254 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTCTT CCACCTCCAC CATCGTTGCC ATCGCCAGTG CTGCCGGAAC CGGTGGCGTG
GGCATCGTGC GCCTGTCCGG GCCGCAGTCG CGGCAGATTG CAGTGCAATT AGGTGTTGCG
CGTCTGCAGC CGCGGCATGC GCACTACGCG CGTTTCCGCG ATGCGCAGGG CGCGGTGATC
GATGATGGCA TTGCGCTGTG GTTCAACGCG CCGCACAGTT TTACCGGCGA AGATGTTGTC
GAGTTGCAAG GCCATGGCAG CCCGGTACTG TTGCGGCAAC TGGTTGCCCG TTGCATCGAA
TTGGGTGCAC GTCAGGCACG CGCCGGTGAG TTCAGTGAGC GTGCGTTCCT CAACGGCAAA
CTCGATCTTG CGCAGGCCGA AGCGATCGCC GACGTGATCG CAGCCGGCGA CCTGCGGGCG
GCACGCGCCG CACGGCGCGC ACTGGATGGC GTGTTTTCGC GACGTGTCGA TGCAGTGGCC
CACACCCTGA CCCGTCTGCG CATCCATGTC GAAGCGGCCA TCGACTTTGC CGACGAGCCG
CTCGACACCT TGGGCGGCAA CCAGGTACGC GACGGCTTGA CCCAGGCGCG CACCCTGCTC
GCCCAGTTGC TGCGCGATGC CGAACGCGGA CGCACGTTGC GCGACGGCCT GCATGCGGTG
TTGATCGGCC CGCCCAACGC CGGCAAAAGT TCGTTGCTCA ATGCACTGGC CGGTAGCGAC
CGCGCGATCG TCACCGATGT CGCCGGCACC ACCCGCGACA CCTTGCACGA AGCCATCCAG
CTCGACGGCT TCGAGTTGAC CCTGGTCGAT ACCGCGGGCC TGCGCGATGG TGGCGATGCG
ATCGAACGCG AAGGCATGCG TCGCGCCCGC GCCGAACTGG AGCGCGCCGA TCTGGCCTTG
GTGGTGCTGG ATGCACGCGA TCCGCAGGCG GCACGCGCGG CGATCGGCGA TGCCATCGAT
GCAGTACCGC GTCAGCTGTG GATCCATAAC AAATGCGATC TGCTCAGCGA TGCCGCGCCA
CTCGACGTCA ATGCGATTGC CGTCTCGGCG GTGACCGGTC AAGGACTTGA GCAACTGCAC
ATCCGCCTGC GCGAGCTTGC GCTCGGCGAT GGCGTGGAAA GCGTCGATGG CGAGTTCTCT
GCCCGCACGC GGCACGTGGA GGCGCTGCGT CGCGCCGAAC GACACGTGGA CGCCGCCGAT
TTGGAACTGG GCTTCGAACA ACTCGAACTG GCCGCCGAAG AACTGCGCCT GGCGCATGAA
GCGCTCGGCG AGATCACCGG GAAGATCAGC GCCGATGACT TGCTCGGCAA GATCTTTTCG
AGTTTCTGTA TCGGCAAGTG A
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| Protein sequence | MSSSTSTIVA IASAAGTGGV GIVRLSGPQS RQIAVQLGVA RLQPRHAHYA RFRDAQGAVI
DDGIALWFNA PHSFTGEDVV ELQGHGSPVL LRQLVARCIE LGARQARAGE FSERAFLNGK
LDLAQAEAIA DVIAAGDLRA ARAARRALDG VFSRRVDAVA HTLTRLRIHV EAAIDFADEP
LDTLGGNQVR DGLTQARTLL AQLLRDAERG RTLRDGLHAV LIGPPNAGKS SLLNALAGSD
RAIVTDVAGT TRDTLHEAIQ LDGFELTLVD TAGLRDGGDA IEREGMRRAR AELERADLAL
VVLDARDPQA ARAAIGDAID AVPRQLWIHN KCDLLSDAAP LDVNAIAVSA VTGQGLEQLH
IRLRELALGD GVESVDGEFS ARTRHVEALR RAERHVDAAD LELGFEQLEL AAEELRLAHE
ALGEITGKIS ADDLLGKIFS SFCIGK
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