| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01133 |
|---|
| Symbol | |
|---|
| ID | 6306479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 3043694 |
|---|
| End bp | 3044419 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642640233 |
|---|
| Product | pili assembly chaperone |
|---|
| Protein accession | YP_001914090 |
|---|
| Protein GI | 188577161 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0694484 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCT CCCGTCATGT TCACAGTCTG CTGACCTCGC TCTTGGTCAT GGCCTGTGCA
ACAGCAAGCG CCACCGCCCG CGCCGCCGAA ATCGCCATCG CGCCCACCAC CGCGCATATC
CCGGCCGACA GCGACCAGGC CACCGTCTGG CTCTACAACC AGGCCGCGCA GCCGTGGCGT
GCCGATGCCA AGCTCTACCG CTGGCGTCAG GACGGCGAAC GCGAACTGCT TGAGCCGGCC
AGCGGCGCCA CCGTCAGCCC GGCGTATTTC GAAATTCCGT CGCAAGGCCG GCAGCTGCTG
CGGGTGATTC GCCTCGGCCC CAGCCCCACG CAGGCCGAAG ACAGCTACCG TCTCGTCGTG
ACCCAGCACG CCATCGGCAA CGAGACCGAC TTGCTGCGCT ATTCCACGCC GGTATTCGCA
CAGTCCAGCC AAGCCAGCGC ACCGCAGCCG GCACTCCAGG CCACCTTGGC CGGGTATGGC
AGCGACCGCA TGCTGCGCAT TCACAACCCC GGGGTCAGCC ACGCACGCCT GGCCGATCTG
GCCTATGTCG ACGCGGATGG CACCCGCCGC AGCATCCGCA AGGACCTGGC CGGCTATGTC
CTGCCTGGTC AGACCCGCCA GTGGGCCCTA CCGGGCAACC TGCCCGCAGG CAGCGGCCGC
TTCGTGGCGC GTATCAATAG CGATATCGAG AGCACGCTGG CTTTAGAGCC GGGCATCGGC
AACTGA
|
|---|
| Protein sequence | MAASRHVHSL LTSLLVMACA TASATARAAE IAIAPTTAHI PADSDQATVW LYNQAAQPWR
ADAKLYRWRQ DGERELLEPA SGATVSPAYF EIPSQGRQLL RVIRLGPSPT QAEDSYRLVV
TQHAIGNETD LLRYSTPVFA QSSQASAPQP ALQATLAGYG SDRMLRIHNP GVSHARLADL
AYVDADGTRR SIRKDLAGYV LPGQTRQWAL PGNLPAGSGR FVARINSDIE STLALEPGIG
N
|
|---|
| |