Gene PXO_00249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00249 
Symbol 
ID6305106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp1614480 
End bp1615118 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content68% 
IMG OID642638877 
Producthypothetical protein 
Protein accessionYP_001912753 
Protein GI188575824 
COG category[S] Function unknown 
COG ID[COG3913] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03373] type VI secretion-associated protein, BMA_A0400 family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGCC CGCCGGGTTT CTACGGCAAG CTGCCCGCGG TTGGCGATTT CGTACATCGC 
CGCTTGCCGG AGACGTTTGT CGACCCGTGG CATGTGGCGA TGCAAGGCGT GTTGTCTGCC 
AACGCGGCAA CGATCGCGAC GCCTGCGCAG CACGCACCGG TGTGGCGCTT CGTGCTGATG 
CCCGGCCTCG CGGGGACGGC TGCATGGGTC GGGGCGATGC GGGCGAGCGT CGATCGGGTC 
GGCCGCGCGT TCCCCTTGGT CATCGCCGCA GCGCTGCCTG CACGCGATGC CGATGGCGCG 
ACAGCTGCCG CCACGCCGAC CCATTTGCGT CTGCCCGCAT GGCTGGATGC TGCCAACACG 
GTGTTGTGCA CTATCGGTGC AAAGCGACAG CAAGATGGTG CCTGGTTGGA CCACGCCTGC 
GTGGCGCTCG CCCAACACGC GCACGACGAC GCATCCGTGC TGGCGCCGCC GCTTGCGGAC 
GCGACCACTG CTGGCAGCAG CCTGTGGTGG ACGGCGATGA CAGCATCTGC GCCGGGTGCC 
TGGATGCGTC TTGCCGGCTG GCCTGCGGCC GGTCATGCGC CGATCCTGCT TGGACCCTCG 
CATGCGCCGA GCGCCTGTCT TGCAGAGGCA GTGCAATGA
 
Protein sequence
MQRPPGFYGK LPAVGDFVHR RLPETFVDPW HVAMQGVLSA NAATIATPAQ HAPVWRFVLM 
PGLAGTAAWV GAMRASVDRV GRAFPLVIAA ALPARDADGA TAAATPTHLR LPAWLDAANT 
VLCTIGAKRQ QDGAWLDHAC VALAQHAHDD ASVLAPPLAD ATTAGSSLWW TAMTASAPGA 
WMRLAGWPAA GHAPILLGPS HAPSACLAEA VQ