| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00135 |
|---|
| Symbol | |
|---|
| ID | 6305220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 1734552 |
|---|
| End bp | 1735538 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642638991 |
|---|
| Product | DedA family protein |
|---|
| Protein accession | YP_001912866 |
|---|
| Protein GI | 188575937 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG0586] Uncharacterized membrane-associated protein
[COG0607] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.288713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGGCC TGATCGAACA GTACGGATTG GCGCTGGTGT TCGCCAACGT GCTGGCGTTG
TCACTCGGGC TGCCGGTTCC GGCATTGCCG ACCCTGTTGC TGGTCGGTGC GAGCTACGCG
TTGCAGGGAG GGAGCGATGC CTGGCTGGCC GGGCTTGCGG CATTGGCCGT CTCCGTATCG
GCGAGTTTGT TGGGCGATCT GGCGTGGTAT CTGGCTGGCC GTCGCTTCGG CAATCGCACC
CTGCAGTCGC TGTGTCGACT GTCGCTGTCG CGCGATAGCT GCATGAAGCA GACCGAGCGC
TTCTTTTCGC GCTGGGGCGT GCGAGTGCTG GCAGTTGCCA AGTTCGTGCC CGGCTTGTCG
CTGGTGTCGG TGCCGATGGC CGGTGCGATG CGGGTGCGTC CTGCGGCGTT CCTGCGATAC
GACGCCTTCG GAGCATCGCT GTGGGCATTG GTCGGCTTGA GTGTGGGCGC CGTGTTCGCG
CACCAGGTGC AGGACGTGCT CGTCTTTTTG TCCGAACTCG GCTCGGGCGC GGTCGTGGTG
TTGGCGGCGT TGCTGGCCTG CTATGTCGGT TGGCGCTGGC GGCGGTACAG CCTGTTGCGA
TCGCTGGAGC ATGCGCGCAT CGCGGTAGAT GAGCTTGTGC CGTTGCTGGA TGGCGAAGAG
GGCCTGCGGC CGACCGTGCT GGACATCCGT GCACCGGGCT ATCGCGATCT GCAGCCCTAC
ATGATTCCGG GCGCCGTGTT TGCCGATGAG CGTCAGCTGG CGCAGATTCT TGCCAGCGTG
CCGCGCGATC GCAGTGTGGT GATCTACTGC GCGTGTCCGG ACGAAGTGTC TGCAGCGTGC
TTGGCCGCGC GGATGCGCGC GCGTGGGTAT CGCGATGTGC GGCCGCTGCT GGGCGGTCTG
GATGCATGGC GCGGTGCCGG GCATCCGGTG ACATCGCTGC TGCCGGTAGT GGTGGTTGCT
GACGCGAGCA TTGCTGCCAC GGCCTGA
|
|---|
| Protein sequence | MQGLIEQYGL ALVFANVLAL SLGLPVPALP TLLLVGASYA LQGGSDAWLA GLAALAVSVS
ASLLGDLAWY LAGRRFGNRT LQSLCRLSLS RDSCMKQTER FFSRWGVRVL AVAKFVPGLS
LVSVPMAGAM RVRPAAFLRY DAFGASLWAL VGLSVGAVFA HQVQDVLVFL SELGSGAVVV
LAALLACYVG WRWRRYSLLR SLEHARIAVD ELVPLLDGEE GLRPTVLDIR APGYRDLQPY
MIPGAVFADE RQLAQILASV PRDRSVVIYC ACPDEVSAAC LAARMRARGY RDVRPLLGGL
DAWRGAGHPV TSLLPVVVVA DASIAATA
|
|---|
| |