Gene Rpic_3170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3170 
Symbol 
ID6288845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3320844 
End bp3321974 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content55% 
IMG OID642626745 
ProductXRE family plasmid maintenance system antidote protein 
Protein accessionYP_001900724 
Protein GI187930237 
COG category[R] General function prediction only 
COG ID[COG3093] Plasmid maintenance system antidote protein 
TIGRFAM ID[TIGR02607] addiction module antidote protein, HigA family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.19493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000000213391 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGGTGCAC GTATTCCGGC CGAGGTCTTT CCTCCCGGGG AATTTTTGAA GGACGAGCTT 
GAGGCTCGTG GGTGGACGCA GGCCGAGTTC GCCGAAATTA TTGGTAAGGA CGCACGCCTG
GTCAGTGAAG TGATCAGCGG CAAGCGTTCT ATTACTCCGG AAACAGCCAT CGCGCTGGGG
GCAGCGCTCG GCAGTTCGCC GGAGCTTTGG ATGAATCTGG AGGGTCAATA CCAACTATCA
AAGGTCCGAC CGAAAGAAGA CTCTATCGCA CGCAAGGCAG ACTTGCATGG CCGGTTCCCC
GTTCGCGAGA TGGTTAAACG GGGTTGGATT GAAGCGACCA AGAGTGTCGA TGTACTACAG
CAGCAACTAA TTGAGTTCTT CGGCATTGAT GAGATCGAGC AGACTCCTCA ACTTCGCTAC
GCGGCCAAAG CCACAACGTA CCATGAGGTC CCTGTAGCGC AGGTGGCATG GTTCTGCCGA
GCGAGAAAGT TGGCAGCATA TTCGCCTACC GCTGCCAGCT TCAATTCTCA ACGACTGGCG
GCAGCGAAAG TTCAACTCAG CGAGCAACTG GCCCACACGG ACGGCACACA ACGAGTGCCG
GGAATTCTGG CGCAGGCCGG AATTCGATTC GTGATTGTTG AGGCTATTGC AGGCTCGAAG
ATCGACGGCG CATGTTTCTG GCTAGACAAA AAGAATCCTG TCGTCGCGAT GTCGATGAGG
TTTGATCGGG TCGACAACTT CTGGCACACC CTCCTTCATG AGTTGGATCA CGTGGAGCAT
GAGGAGGGAC AGTCTGCACC TATCCTCGAC GTAGACATCA TGGATGCCGA CTCAGGCAAG
CCGGACATTG AAGCAAGGGC GAATGAAAAC GCGGCTGAAG CGCTCATTCC CAAGCGGGAA
ATGGACGGCT TTATTGCAAG GGTCAATCCA ATGTTTAGCG AGGAGCAGAT CGTTGGTTTT
GCTCGGCGTA TCGCCGTACA TCCGGGCCTC GTTGTAGGTC AGCTCCAGAA TCGAGGCTTG
ATTCCCTGGA GCTTCCATCG GAAGCACTTG GAGAAGGTCC GAGAGTACGT TGTAGCGAAT
GCTATTACCG ACGGATTTGG TCATCGTGTG ATCGAATCAG CATCGATGTG A
 
Protein sequence
MGARIPAEVF PPGEFLKDEL EARGWTQAEF AEIIGKDARL VSEVISGKRS ITPETAIALG 
AALGSSPELW MNLEGQYQLS KVRPKEDSIA RKADLHGRFP VREMVKRGWI EATKSVDVLQ
QQLIEFFGID EIEQTPQLRY AAKATTYHEV PVAQVAWFCR ARKLAAYSPT AASFNSQRLA
AAKVQLSEQL AHTDGTQRVP GILAQAGIRF VIVEAIAGSK IDGACFWLDK KNPVVAMSMR
FDRVDNFWHT LLHELDHVEH EEGQSAPILD VDIMDADSGK PDIEARANEN AAEALIPKRE
MDGFIARVNP MFSEEQIVGF ARRIAVHPGL VVGQLQNRGL IPWSFHRKHL EKVREYVVAN
AITDGFGHRV IESASM