Gene Rpic_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1425 
Symboltmk 
ID6289303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand- 
Start bp1514501 
End bp1515118 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content65% 
IMG OID642624992 
Productthymidylate kinase 
Protein accessionYP_001898998 
Protein GI187928511 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.578696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.216838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA AGTTCATCAC ATTCGAAGGG ATCGACGGCG CGGGCAAGAG CACGCACCTG 
GCGTGGTTTG CACAGCAACT GCAGGCGAAG CTCGCGCCCC TGGGCAAAAA GGTGGTCGTC 
ACCCGCGAGC CCGGCGGCAC GCCGCTGGGC GAGCGACTGC GCGAAGTGTT GCTGCACGAA 
CGCATGCACC TGGAAACCGA AGCGCTGCTG ATGTTCGCGA GCCGCCGCGA GCACATTGCC 
GAGGTGATTC AGCCCGCGCT GGACGCCGGC GATTGGGTCA TCTCGGACCG CTTCACCGAT 
GCCACGTTCG CCTATCAGGG CGGGGGCAGG GGCCTGGCAA TCGACCGGCT GGAAGCGCTG 
GAGCACTGGG TACAGCAGGG CCTGCAGCCG ACCAAGACCA TCCTCTTCGA TCTGGCGCCT 
GAAATTGCCG CCGCGCGCCT GGCCGATGCC CGCACGCCGG ACAAGTTCGA GGCCGAATCA 
GCGCAGTTCT TCCTGCGCAC GCGCGCCGAA TACCTGCGCC GCGCGGCAGC CGAACCGGAT 
CGATTTGTCG TGCTCAACGC CAACCGCGAG CGCAGTGATA TCCAGAAAGA CTTGGAGAAT 
CTGCTTGCAA CGCTCTGA
 
Protein sequence
MTGKFITFEG IDGAGKSTHL AWFAQQLQAK LAPLGKKVVV TREPGGTPLG ERLREVLLHE 
RMHLETEALL MFASRREHIA EVIQPALDAG DWVISDRFTD ATFAYQGGGR GLAIDRLEAL 
EHWVQQGLQP TKTILFDLAP EIAAARLADA RTPDKFEAES AQFFLRTRAE YLRRAAAEPD 
RFVVLNANRE RSDIQKDLEN LLATL