| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0838 |
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| Symbol | |
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| ID | 6289414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 887832 |
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| End bp | 889835 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642624402 |
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| Product | Patatin |
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| Protein accession | YP_001898420 |
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| Protein GI | 187927933 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.507854 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCTC TGACGGCCTT CCTGTTTCGC CGCCGCGGCT CCCGATTGGC TGCCGCCGTG
CTTACCGCGT TTGTGGCACT GACGACGTTG CCGCCCGCCG TGCATGGCCA GACTGCGGCG
GCGCCAGTGC AGGCGAACAC CGAATCGACG CGGCCGCGAA TCGGTCTGGT GCTCTCGGGC
GGCGGGGCGC GCGGCTATGC GCATATTGGC GTGCTGAAGA TGCTGGAGCG CATGCGCATT
CCTGTGGATG TGATTGCCGC CACCAGCATG GGCGCCGTGG TGGGCGGGCT CTACGCCAGC
GGTATGCGGG CGGACGCGTT GGAGCAGAAG CTCTCACAGG TGGACCTGAG CGACATCGCC
TTCGATCGCA ACGATCGCGC CAAGCTGCCG CAGTCGCTGC GCGAGGATGA TTTCCAGTAC
CCGATCGGCC TGTCGGCCGG CTATGGCAAC GGCAACCTCA AGCTGCCGGC CGGGCTGGTG
CAGGGCAACC GCCTGCTCGC GCTCCTCAAG AACTGGACGG CGCAGTGGCC CGACAACATC
GACTTCTCGC GCCTGCCCAT TCCGTTCAAG GCCATGGCGA CGGATCTGGC CACGGGCGAC
GGAGTGATTC TCGACCACGG CTCGCTGCCG CTGGCGATGC GGGCCAGCAT GGCGGTGCCG
GGGCTGTTCG CGCCCTTCGA GGTGGGCGGG CGTACGCTGG TGGATGGCGG CCTGGTGAGC
AACCTGCCCG TGCAGCTTGC GCGCGACATG GGGGCTGACA TCATCATCGC CGTCAACATC
GGGTCGGACT TGGAGCGGCC TGAAGACCTG GCCTCGCCTG CGGCGGTGAC GCAACAGATG
ATCACCATCC TCGTCGGCCA GAACGTCCGT GCGCAGAAGG CGCTGCTGCG CGGCCAGGAT
GTGCTGATCG AGCCGCAGCT CTCGGAGCTT TCGTTCACCG ATTTCGCCAA GGGCCCGCAG
GGTGTGCGGC AGGGTGAACG CGCGGCGCAG GGCGTCGAGG CGAAGCTCGC GACGTTGTCG
CTGTCGCCGC ACGCGTATGC CGCGTACCGC GCTACCCACG AGCCGCAGGG CACGCTCGTG
GCGGGCGCAC GCATTGACGC CATCGATGTG ACCACCAGCG GCCGCGTGCC GCCCGCGCGC
GTGCGTCAGT TGATCAAGGT GCGTGAAGGC GATGCGTATG ACGCCGAGGC GCTGAACCGC
GAACTGTCGG CGCTGGCCAC CACGGGCGAC TTCGAAACCG TCACGCAGCA ACTGGTGGAA
CAGAACGGTG TGCATACGCT GAAGATCGAC GCGCACGAAA AGTCGTGGGG CAACCAGTTC
TTCCTGTTCG GGCTGGGCAT GTCGACCAAC TTCGACGGGC GTGGCGCATT CAACATCAAC
CTTGGCCATC GGTATCCGTG GCTCACGCAG AGCGGGCTGG AGTGGCGCAA CGACATCGTC
CTCGGCAGCA ACCGGGCGAG CATCCATACC GAGCTGCGGC AGCCGCTGTG GCAGGCGCGC
GGGTTTTACG TGGCGCCGTA TGCCGAGTAC TCGCGTCGCA GATCGGATCT CTACTTTGAC
GATCAGCCGC CCACCCGGGA CGCCAAGCCG TTCAACAACC TGACCATCGA GACGGCGCGC
GCCGGCGTTG ACCTGGGCAT CCCGTTGGGC CGCAAGGGTG AGCTGCGCCT GGGCGTGAAC
TACGTCAGGA AGACGGCAAC GTTCAATTAC CTGCAATTGA TCGCGGACGA GTCCGGGAAT
GTCGTGGATG CGACGGCTGT TGACACCTTG CGCACCCAGC AGCCGGCCTT TCGCGCCCAA
CTTACGCTGG ACCAGCTCGA CGATCCGCTG TTCCCGCGCA GCGGCTATTA CTTCTACAGC
AGCGTGGAAG CGGGCTTCGG TTCGCCCGAC AAGAAGTTCA ACACCGCCCA GGCCAAGGGC
CTAGAGCGTG TTATGCACTT TCCGTCGGTG CTGCAGTCGA AGCGTGATGG AGAAACGCAG
ACCGTATCCG AGCGACGTGA GTGA
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| Protein sequence | MASLTAFLFR RRGSRLAAAV LTAFVALTTL PPAVHGQTAA APVQANTEST RPRIGLVLSG
GGARGYAHIG VLKMLERMRI PVDVIAATSM GAVVGGLYAS GMRADALEQK LSQVDLSDIA
FDRNDRAKLP QSLREDDFQY PIGLSAGYGN GNLKLPAGLV QGNRLLALLK NWTAQWPDNI
DFSRLPIPFK AMATDLATGD GVILDHGSLP LAMRASMAVP GLFAPFEVGG RTLVDGGLVS
NLPVQLARDM GADIIIAVNI GSDLERPEDL ASPAAVTQQM ITILVGQNVR AQKALLRGQD
VLIEPQLSEL SFTDFAKGPQ GVRQGERAAQ GVEAKLATLS LSPHAYAAYR ATHEPQGTLV
AGARIDAIDV TTSGRVPPAR VRQLIKVREG DAYDAEALNR ELSALATTGD FETVTQQLVE
QNGVHTLKID AHEKSWGNQF FLFGLGMSTN FDGRGAFNIN LGHRYPWLTQ SGLEWRNDIV
LGSNRASIHT ELRQPLWQAR GFYVAPYAEY SRRRSDLYFD DQPPTRDAKP FNNLTIETAR
AGVDLGIPLG RKGELRLGVN YVRKTATFNY LQLIADESGN VVDATAVDTL RTQQPAFRAQ
LTLDQLDDPL FPRSGYYFYS SVEAGFGSPD KKFNTAQAKG LERVMHFPSV LQSKRDGETQ
TVSERRE
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