Gene Rpic_0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0242 
Symbol 
ID6288525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp257275 
End bp258708 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content64% 
IMG OID642623812 
Productpeptidase M16 domain protein 
Protein accessionYP_001897836 
Protein GI187927349 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTGG CGGCGGGCCT GCTGGCCGGC CATGTTGGCG CGCAGGAGCT GGCCGCTGCA 
CCGGGCCGTC CGGTGGCCGC AGCCAGCAGT GCCAAAGTAG GTGCCAGCCA GTCCGACACG
CACGAATACA AGCTGCCTAA CGGGCTGCAG TTGATCGTCA AGGAAGACCA CCGCGCCCCC
ACCGTGGCGC ACATGGTCTG GTATCACGCC GGCAGCATCG ACGAGCACAA CGGCACCACG
GGTGTCGCCC ACATGCTTGA GCACATGATG TTCAAGGGCA CCAAGGCAGT TGGCCCGGGC
GAGTTCTCCC GCCGCGTGGC TGCCCTGGGT GGCCGTGAAA ACGCCATGAC AACGCGCGAC
TTCACGATGT ACTTCCAGCA GATCGAGAAA TCGCACTTGG CCGATGTGAT GGGGCTCGAA
GCCGATCGCA TGGCCAATCT CCAGCTGACC GACAAGGAGT TCAAGCCGGA GATGAACGTG
GTGAAGGAAG AGCGCCGCAT GCGCATCGAC GACTCCGCCC GTTCCACTGT CTATGAGCAG
ATGCTCGCCA CGCTGTTCAA TGCCGCGCCG TACCGCAACC CGACCATCGG CTGGCCGGGA
GACCTCGACA CGATGACGGT GCAGGACGCC CAGAACTGGT ACCACGCCTG GTACACGCCC
AACAACGTCA CCGTGATCGT CGCGGGCGAT GTGAAACCCG ACGAAGTCTT CCGCCTCGCG
CAGCGCACCT ACGGCAAGCT CAAGCCGCAT GCACTGCCGC GCCGCTATGC GCAGGAGGAG
CCCAAGCAGA TCGGCGTGAA GCGCATCTGG GTGAAGGCGC CGGCCGAGAA TCCGTACGTT
GTGCTGGCCT ACAAGGTGCC GCGCCTGAGC GATGTGGAAA AAGACGTCGA TCCGTATGCG
CTGGAAGTCC TGTCGGCCGT GCTCGATGGC TATGACAACG CGCGCCTGCC GAGCCAGCTC
GTCAAGGGCG AAAAGCGCAT CGCCGACGAT GTCAACGCCG GCTACGACGG TCTGAACCGC
GGTCCGTCGA TTTTCCTGAT GGACGGTACG CCCGCCGACG GCCACACCAC CGCCGAGATC
GAACAGGCGC TGCGCGGGCA GATCGAGCGC ATCGCCAAGG AAGGCGTGAC CGATGCCGAA
CTGAAGCGCG TGAAGGCACA GGTTGTGGCC GCGCAGATCT ACAAGCGCGA CTCGGTTTTC
GGGCAGGGCA TGGAGATCGG CATGAACGAG ATGAGCGGCC TGTCGTGGCG CTCCATCGAT
CGCCAGCTTG AGAAGATCAA GGGCGTGACG TCGGCGCAGA TCCAGCACGT GGCGCAGACG
TACTTCAGCG AAGACAACCT CGTCGTCGCC ACGCTGCTGC CGCAACCGAT CGATCCCAAC
AAACCGGCGC GCAAGCCCGT TCCCGGCATG CGCGATGAAG GAGGGCTGCG TTGA
 
Protein sequence
MALAAGLLAG HVGAQELAAA PGRPVAAASS AKVGASQSDT HEYKLPNGLQ LIVKEDHRAP 
TVAHMVWYHA GSIDEHNGTT GVAHMLEHMM FKGTKAVGPG EFSRRVAALG GRENAMTTRD
FTMYFQQIEK SHLADVMGLE ADRMANLQLT DKEFKPEMNV VKEERRMRID DSARSTVYEQ
MLATLFNAAP YRNPTIGWPG DLDTMTVQDA QNWYHAWYTP NNVTVIVAGD VKPDEVFRLA
QRTYGKLKPH ALPRRYAQEE PKQIGVKRIW VKAPAENPYV VLAYKVPRLS DVEKDVDPYA
LEVLSAVLDG YDNARLPSQL VKGEKRIADD VNAGYDGLNR GPSIFLMDGT PADGHTTAEI
EQALRGQIER IAKEGVTDAE LKRVKAQVVA AQIYKRDSVF GQGMEIGMNE MSGLSWRSID
RQLEKIKGVT SAQIQHVAQT YFSEDNLVVA TLLPQPIDPN KPARKPVPGM RDEGGLR