| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3962 |
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| Symbol | araH |
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| ID | 6284557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 4438704 |
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| End bp | 4439708 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642623549 |
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| Product | L-arabinose transporter permease protein |
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| Protein accession | YP_001897573 |
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| Protein GI | 187925931 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGACAC CTTCAACCGA TTCCTCCACC CCAGCGGTCG CCTCAGCGGG CTTGAGCGCG
CGCGCCGCGC GTACCTGGGA CCTGATCAAC AAGTCGGGCA TCGTGATGGT GTTCGTGATT
CTGTTCGCGG CTTTGTCGTT CACCGTGCCG GATTTTTTAA GCTCGCGAAA CATCCAGGGC
TTGCTGCTCT CCGTCACGCT GATCGGCTCC ATCTCCGTGA CGATGATGTT CGTTCTCGCG
CTCGGCGAAG TGGATTTGTC GGTGGCGTCG ATCGTCGCGT TCGCGGGCGT GGTGGCGTCC
ACCTTGATCA CCGCGACGCA TAGCGTGATC CTCGGCGTCG CGGCCGGCGT GCTTGCGGGC
GGCGCGGTTG GGCTCGTCAA CGGTGTGCTG GTTGCGCGCT ACAAAATCAA TTCGCTGATC
GTCACGCTGG CCATGATGGA GGTCGTGCGC GGCCTCGCCT ACATCACCTC GAACGGCGAC
GCCGTGATGA TTTCCGAAGA ACGTTTCTTC GACCTCGGCG GCGGCGCGTT CCTCGGCATT
TCGTATCCGA TCTGGAGCAA CATCATTGGC TTCGTGCTGT TCGGCTTTTT GCTGAAGAAA
ACCGTGTTCG GCAAGAACGT GCTGGCCGTC GGCGGCAATA GCGAGGCTGC GTTGCTGGCG
GGCTTGCCGG TGACGCGGAT CAAGATCACA GTGTTCGTAT TGCAGGGCCT CGTCACCGGA
TTCGCAGGCG TGATGCTTGC GTCACGTATG AGTCTGGGCG ATCCGAAGAC CTCGGTCGGC
CTCGAACTCG GCGTGATTTC CGCATGCGTG CTCGGCGGCG TCTCGCTCAC GGGCGGCGTC
GCGACGATTT CCGGTGTGCT GGTCGGCGTG CTGATCATGG GCTCGGTGCA GGACGCCATG
AGCCTGCTCA ATGTACCGAC CTTTTACCAA TACCTTATTC GCGGCGGGAT CCTGCTGCTA
GCGGTGCTGT TCGATCAGTT CCGCCGTAGC AAGCGCGTGC ACTGA
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| Protein sequence | MQTPSTDSST PAVASAGLSA RAARTWDLIN KSGIVMVFVI LFAALSFTVP DFLSSRNIQG
LLLSVTLIGS ISVTMMFVLA LGEVDLSVAS IVAFAGVVAS TLITATHSVI LGVAAGVLAG
GAVGLVNGVL VARYKINSLI VTLAMMEVVR GLAYITSNGD AVMISEERFF DLGGGAFLGI
SYPIWSNIIG FVLFGFLLKK TVFGKNVLAV GGNSEAALLA GLPVTRIKIT VFVLQGLVTG
FAGVMLASRM SLGDPKTSVG LELGVISACV LGGVSLTGGV ATISGVLVGV LIMGSVQDAM
SLLNVPTFYQ YLIRGGILLL AVLFDQFRRS KRVH
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