Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3335 |
Symbol | |
ID | 6280990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3754723 |
End bp | 3755481 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642622909 |
Product | peptidase M48 Ste24p |
Protein accession | YP_001896950 |
Protein GI | 187925308 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.490632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0905245 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCGT ACCGCTTTGC CATTGCCGCT TCCGCCTGCG CCTTATTTGC AGCGTGCTCG AATATCAGCA ACGTCGATCC GTCCGCGCTG ATCAAATCCG GCCAGATGGC CACGCAGGCT GCCACGCTGA GCGACACCGA CGTGCGTGCT CTGACCGACA AGTCGTGCAC GCAACTGGAC AGCGAAAACA AGATTGCCGC CGCGAACAGC AATTATCAGA AGCGCCTGAA CAAGATCGCC GCGCAACTGG GCGACAACAT CAACGGCACG CCGGTGAACT ACAAGGTGTA CATGACCAAG GACGTCAACG CGTGGGCCAT GGCGAACGGC TGCGTGCGCG TCTACAGCGG TCTCATGGAC ATGATGAACG ACAACGAAGT GCGCGGCGTG GTCGGCCATG AAATGGGCCA CGTGGCGCTC GGCCACACGA AGAAGGCGAT GCAGGTCGCG TATGCGACTT CGGCGGCGCG CTCGGTGGCG TCGTCGGCGG GTGGTGTGGC GGGCGCGCTG TCCGGTTCGC AACTCGGTGA CTTTTCCGAG AAGCTGATTA ACGCGCAATT CTCGCAAACC CAGGAAAGCG CAGCGGACGA TTATTCGTTC GACTTGCAGA AAAAGAAAAA TCTCGATCCG TCGGGATTGG TGACGGCGTT CAACAAGCTC GCCGCATTGG ATGGCGGTAA ATCGAGTATG TTGAGTTCGC ATCCGGCGTC GCCGGCGCGG GCGCAGCATA TTCAGCAGCG TATTGCTTCG AACCAGTAA
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Protein sequence | MKSYRFAIAA SACALFAACS NISNVDPSAL IKSGQMATQA ATLSDTDVRA LTDKSCTQLD SENKIAAANS NYQKRLNKIA AQLGDNINGT PVNYKVYMTK DVNAWAMANG CVRVYSGLMD MMNDNEVRGV VGHEMGHVAL GHTKKAMQVA YATSAARSVA SSAGGVAGAL SGSQLGDFSE KLINAQFSQT QESAADDYSF DLQKKKNLDP SGLVTAFNKL AALDGGKSSM LSSHPASPAR AQHIQQRIAS NQ
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