| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2171 |
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| Symbol | |
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| ID | 6281756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2448854 |
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| End bp | 2450056 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642621730 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001895796 |
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| Protein GI | 187924154 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CGCTACTGGC AGTATGTTTT GTCGCGGCCT TTCCGGCATT TGTGCACGCA
CAGAGTGCCG TCACGCTATA CGGCATTATC GATGAAGGTG TGAGTTATAC GAGCAATGCG
GCGACGCCCA ATAGCAACGG CAGCGTCTCG GGCCACAGCG CGGTGCGTCT GTTGAGCGGC
GTGATGCAAC AAAGCCGCTG GGGTTTGCGC GGCTCGGAAG ATCTCGGCGG GGGCATGAAG
GCGATCTTCA TGCTGGAGAA CGGTTTCGAC GCCAGCACCG GCAAGTTCGG CCAGGGCGGG
TTGCTGTTCG GCAAGAAGGC ATGGGTGGGA TTATCCGGTG CATTCGGCAC GGTGACGCTC
GGGCGCCAAT ACGATACCAA CGTCGACATT CTCGGCCCAT TCGAAGTGGG TGATCAATGG
GGCGGCTACA TGGCCGCGCA TCCGGGCGAT CTCGACAACA TCAACAACAC CAACTCGACC
AATAACTCGA TCAAGTTCAC CAGCAATACG TATGGCGGGC TGACGCTGGA AGCGCTATAC
AGCCTTGGCG GCGTGGCCGG CAACTTCTCG CGCAATCGCA TCTGGTCGGT GTCGGCGGGT
TATGTGAACG GACCGTTGGC ATTGGGGGTG GGATATCTCG ACGTCGCCAA TCCGAATACG
TCTTTCTTCG GCAGCATGGG CAGTCCCGCC GCAACGGCGA ACGGCGTGCC GGGGAGCAAT
ATGTTGTCGC CGGTTTATTC GGGCTATGCG TCGGCAAAAT CCATGCACGT GATCGGCGCG
GGCGCGTCCT ACCTTTTCGG CGCCGCGACT TTCGGCGCGA CGTATTCGAA TACGAGCTTT
CGCGATCTCG GGGATTTGTC TTCGGGACCG AATCCGGCTG GTTTGAGCGG CAACGCCACG
TTGAATAACG CCGAGGTTAA CTTCAAGTAT CAGATCACGT CGGATCTGTT ATGCGGGTTC
GCGTATGACT ATACGAAAGG AAGCTCGGTG AAGGGCATGA CGGGGGCGAG TTATCATCAG
TTCGCGTCGG GCATCGATTA CTTCGTGTCG AAGCGTACGG ATGTTTATCT GGTTGGCGTT
TATCAGAAGG CGTCGGGCAC CGATTCGACG GGGAAACAGG CGGTTGCCGC CATCAACGGG
CCGTCTGCTT CGGCGGATGA CAAGCAGGCG GTGGTGCGGA TTGGGATGCG GCATAAATTC
TGA
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| Protein sequence | MKKTLLAVCF VAAFPAFVHA QSAVTLYGII DEGVSYTSNA ATPNSNGSVS GHSAVRLLSG
VMQQSRWGLR GSEDLGGGMK AIFMLENGFD ASTGKFGQGG LLFGKKAWVG LSGAFGTVTL
GRQYDTNVDI LGPFEVGDQW GGYMAAHPGD LDNINNTNST NNSIKFTSNT YGGLTLEALY
SLGGVAGNFS RNRIWSVSAG YVNGPLALGV GYLDVANPNT SFFGSMGSPA ATANGVPGSN
MLSPVYSGYA SAKSMHVIGA GASYLFGAAT FGATYSNTSF RDLGDLSSGP NPAGLSGNAT
LNNAEVNFKY QITSDLLCGF AYDYTKGSSV KGMTGASYHQ FASGIDYFVS KRTDVYLVGV
YQKASGTDST GKQAVAAING PSASADDKQA VVRIGMRHKF
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