Gene Bphyt_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2089 
Symbol 
ID6284586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2355811 
End bp2357061 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content65% 
IMG OID642621650 
Productamidohydrolase 
Protein accessionYP_001895716 
Protein GI187924074 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.608536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCACCT TCGTCCTACG TAACGGCGCG CTTCTCGATC CCACCCGTGC TGATCTGCTG 
GAAGGCTTTG AAATTCTCAT CGAGGATGGC TTCGTGCGCG AAGTGTCCGA CAAGCCGATC
AATAGCAGCA AAGCGCATGT GATCGACGTC AAAGGCAAAA CGATCATGCC GGGTCTGATC
GATCTGCACG TGCATGTCGT TGCCATCGAA TTCAACTTGC CGCGCGTGGC CACGCTGCCC
AACGTGCTCG TCACGCTCCG CGCCGTGCCG ATCATGCGCG CGATGCTGCG CCGCGGCTTT
ACCACCGTGC GCGACGCGGG CGGAGCAGGG TATCCATTCA AGCAGGCGGT CGAGTCGGGG
TTGATCGAAG GTCCGCGCCT GTTTGTGTCC GGCCGCGCGT TGAGCCAGAC GGGCGGTCAC
GCCGATCCGC GCGCCCGCTC CGATTACATG CCGCCCGATG CCCCTTGCGG ATGCTGCGTG
CGCGTGGGTG CGCTCGGCCG CGTGGCGGAC GGCGTCGATG AAGTGCGCCG CGCCGTGCGC
GAGGAACTGC AGATGGGCGC GGACCAGATC AAGATCATGG CGTCGGGCGG GGTGGCTTCA
CCTACGGATC CCGTCGGCGC TTTTGGTTAC TCCGAAGATG AGATCCGCGC CATCGTCGCC
GAAGCAGAGG GACGCGGCAC GTATGTGCTC GCGCATGCCT ACACGCCCGC GGCAATCGCG
CGCGCCGTGC GCTGCGGCGT GCGCACGATC GAACACGGCA ACCTGATCGA CGAGGAGACC
GCGCGCCTCG TCGCGGAGCA CGGCGCGTAT GTCGTGCCGA CCCTCGTCAC TTACGACGCC
CTTGCAAGCG AAGGCGAGAA ATACGGACTG CCGCCGGCCA GCATTGCAAA GGTCGCGGAC
GTGCATGGCG CCGGTCTGCA GTCGATCGAA ATCATGAAGC GCGCCGGCGT GAAGATGGGC
TTCGGCACGG ATCTGCTCGG CGAGGCGCAG CGGTTGCAAA GCGATGAGTT CCGGATTCTG
GCCGACGTCA TGTCGCCGGC CGAAGTGATC GCGAGCGCGA CGCTCGTCGG CGCGGAAGTG
CTCGGCATGC AGGACAAGCT CGGCAGAATC ATGCCGGGCG CGCATGCGGA TGTGCTGGTG
GTCGACGGCA ATCCTTTGAA GTCCGTCGAT TGCCTGTTGG GGCAGGGCGA GCATATACCG
CTCGTCATGA AGGACGGCCG GATCTTCGTC AACGAACTCG AAAGCGCCTG A
 
Protein sequence
MTTFVLRNGA LLDPTRADLL EGFEILIEDG FVREVSDKPI NSSKAHVIDV KGKTIMPGLI 
DLHVHVVAIE FNLPRVATLP NVLVTLRAVP IMRAMLRRGF TTVRDAGGAG YPFKQAVESG
LIEGPRLFVS GRALSQTGGH ADPRARSDYM PPDAPCGCCV RVGALGRVAD GVDEVRRAVR
EELQMGADQI KIMASGGVAS PTDPVGAFGY SEDEIRAIVA EAEGRGTYVL AHAYTPAAIA
RAVRCGVRTI EHGNLIDEET ARLVAEHGAY VVPTLVTYDA LASEGEKYGL PPASIAKVAD
VHGAGLQSIE IMKRAGVKMG FGTDLLGEAQ RLQSDEFRIL ADVMSPAEVI ASATLVGAEV
LGMQDKLGRI MPGAHADVLV VDGNPLKSVD CLLGQGEHIP LVMKDGRIFV NELESA