Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2089 |
Symbol | |
ID | 6284586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2355811 |
End bp | 2357061 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642621650 |
Product | amidohydrolase |
Protein accession | YP_001895716 |
Protein GI | 187924074 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.608536 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACCACCT TCGTCCTACG TAACGGCGCG CTTCTCGATC CCACCCGTGC TGATCTGCTG GAAGGCTTTG AAATTCTCAT CGAGGATGGC TTCGTGCGCG AAGTGTCCGA CAAGCCGATC AATAGCAGCA AAGCGCATGT GATCGACGTC AAAGGCAAAA CGATCATGCC GGGTCTGATC GATCTGCACG TGCATGTCGT TGCCATCGAA TTCAACTTGC CGCGCGTGGC CACGCTGCCC AACGTGCTCG TCACGCTCCG CGCCGTGCCG ATCATGCGCG CGATGCTGCG CCGCGGCTTT ACCACCGTGC GCGACGCGGG CGGAGCAGGG TATCCATTCA AGCAGGCGGT CGAGTCGGGG TTGATCGAAG GTCCGCGCCT GTTTGTGTCC GGCCGCGCGT TGAGCCAGAC GGGCGGTCAC GCCGATCCGC GCGCCCGCTC CGATTACATG CCGCCCGATG CCCCTTGCGG ATGCTGCGTG CGCGTGGGTG CGCTCGGCCG CGTGGCGGAC GGCGTCGATG AAGTGCGCCG CGCCGTGCGC GAGGAACTGC AGATGGGCGC GGACCAGATC AAGATCATGG CGTCGGGCGG GGTGGCTTCA CCTACGGATC CCGTCGGCGC TTTTGGTTAC TCCGAAGATG AGATCCGCGC CATCGTCGCC GAAGCAGAGG GACGCGGCAC GTATGTGCTC GCGCATGCCT ACACGCCCGC GGCAATCGCG CGCGCCGTGC GCTGCGGCGT GCGCACGATC GAACACGGCA ACCTGATCGA CGAGGAGACC GCGCGCCTCG TCGCGGAGCA CGGCGCGTAT GTCGTGCCGA CCCTCGTCAC TTACGACGCC CTTGCAAGCG AAGGCGAGAA ATACGGACTG CCGCCGGCCA GCATTGCAAA GGTCGCGGAC GTGCATGGCG CCGGTCTGCA GTCGATCGAA ATCATGAAGC GCGCCGGCGT GAAGATGGGC TTCGGCACGG ATCTGCTCGG CGAGGCGCAG CGGTTGCAAA GCGATGAGTT CCGGATTCTG GCCGACGTCA TGTCGCCGGC CGAAGTGATC GCGAGCGCGA CGCTCGTCGG CGCGGAAGTG CTCGGCATGC AGGACAAGCT CGGCAGAATC ATGCCGGGCG CGCATGCGGA TGTGCTGGTG GTCGACGGCA ATCCTTTGAA GTCCGTCGAT TGCCTGTTGG GGCAGGGCGA GCATATACCG CTCGTCATGA AGGACGGCCG GATCTTCGTC AACGAACTCG AAAGCGCCTG A
|
Protein sequence | MTTFVLRNGA LLDPTRADLL EGFEILIEDG FVREVSDKPI NSSKAHVIDV KGKTIMPGLI DLHVHVVAIE FNLPRVATLP NVLVTLRAVP IMRAMLRRGF TTVRDAGGAG YPFKQAVESG LIEGPRLFVS GRALSQTGGH ADPRARSDYM PPDAPCGCCV RVGALGRVAD GVDEVRRAVR EELQMGADQI KIMASGGVAS PTDPVGAFGY SEDEIRAIVA EAEGRGTYVL AHAYTPAAIA RAVRCGVRTI EHGNLIDEET ARLVAEHGAY VVPTLVTYDA LASEGEKYGL PPASIAKVAD VHGAGLQSIE IMKRAGVKMG FGTDLLGEAQ RLQSDEFRIL ADVMSPAEVI ASATLVGAEV LGMQDKLGRI MPGAHADVLV VDGNPLKSVD CLLGQGEHIP LVMKDGRIFV NELESA
|
| |