| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1757 |
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| Symbol | |
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| ID | 6280918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1977495 |
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| End bp | 1979087 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642621320 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001895389 |
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| Protein GI | 187923747 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAG ATCCACAGCC GGCTGTCGCA AGGGAATGGC GCGCCGAAGG CGACGCCTGC
GCCGCGCGCG GCGAGCTCGA CGCCGCGCTC CAACGTTACG AAAGCGCCCG CGCACTCGAT
CCCACCGACG CGCTCGTCCA GCAGCGCCTC GCGGCCACGC TCGCCGCGTT GAACCGGTTT
CCCGAAGCCG TCGTCCGCTA TCACGAAGCG ATCGCGCTCG ATCCGCGCGA CAAGGATTCG
CATCACGGCC TCGGCTGGAC GCTCGAGCAG ATGCATCGCC TTGAACAGGC GGTGGACGCT
TATCGCGAGG CGACGCGCGT GAATCCGCAA GCCGACGGCT CGCACAACAA CATGGGCAAC
TGCCTGCAGG CACTCGGCCG TTTCGACGAA GCGCACGAAG CGTATCGCCG TGCGATCGAA
GCCGCGCCGC AGGTGCCGCT GTACTACCGC AACTTCGTGC AGTCCAAGCG CCTCGCCGCC
GACGATCCCG TGTTCCTCGC GATGGAGCGT CTCGTCGTCG ATGCGGCTTC GCTCACGCCG
GCCAATCAGG CGGAGCTTCA CTTCGCGTAC GGGCAGGCGC TGTCCGACGT GGGCTGCAAC
GACGCGTCGT TCGATCACTT TCTGAAGGGC AATGCGCTGC ACCGCGCCGG CGTGCGTTAC
AACGAAGCGG AAACGCTCGG TCTGTTCGCG CATCTGCCCG AACTGATGAC TGCCGAGCTG
CTGGCCTCGA AGCGCGGTCT TGGCGACGCA TCGCAGGCGC CGATTTTTAT CGTCGGCATG
CCGCGCTCGG GTTCGACCTT GATCGAACAG ATTCTCGCGA GCCACCCGCA AGTGTTCGGC
GCGGGCGAGC GCACGGAATT CGGCGAGGCG CTGGTAAACT GCATCCGCCG CGATCTGGAT
GATCCGTTGC GGATCGATAT CGAAGCTTTG GAAGAGGTCG GCGCCGCGCC GTTGCGCGCG
CTCGGCGTGG ACTATCTGCG CCGCATGCGC AATGCGTTGC CGGAACTCCA GAGCAGGGCG
CAAAACGACC AACGCAATCC GGCTGCGAAC TACACGCACT TCACCGACAA GTATCCGTTC
AATTTCATCA ACCTCGGCCT GATCCATCTC GCGTTGCCGA ATGCCCGTTT CATTCACAGC
AGCCGCGCAC CGTTGCCAAC CTGCCTGTCG ATTTTTTCGC GGATCTTTCA CGACGTGCCG
TTCAGCTATG ATCTCGGCGA ACTGGGCCGC TACTACCGCG CGTACGACGC GTTAATGGCG
CACTGGCAAC GCGTGCTCCC CGAAGGTGTG ATGATCGAAG TCAAGTATGA AGAACTGGTC
GACGATTTTG AAGCCAATGT GCACCGCCTG CTCGCGCATT GCGGGCTCGA ATGGGACGAA
CGCTGTCTGT CGTTTTATCA GACCGCGCGC CAGGTGAATA CGGCCAGTTC CGCGCAGGTG
CGCCGGCCGC TGTATAAGAC GTCGCTGCAA CGCTGGCAGC CGCCGCGAGC GTTGTTGCAG
CCGTTGCTCG ACGGCTTGGG CTCAGAGTTG GCGGCGGCGC ATCGTCACGA GACTGGCGAG
GTCGAGGCAA GCGGCACGGA GCATCGCTCA TGA
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| Protein sequence | MKQDPQPAVA REWRAEGDAC AARGELDAAL QRYESARALD PTDALVQQRL AATLAALNRF
PEAVVRYHEA IALDPRDKDS HHGLGWTLEQ MHRLEQAVDA YREATRVNPQ ADGSHNNMGN
CLQALGRFDE AHEAYRRAIE AAPQVPLYYR NFVQSKRLAA DDPVFLAMER LVVDAASLTP
ANQAELHFAY GQALSDVGCN DASFDHFLKG NALHRAGVRY NEAETLGLFA HLPELMTAEL
LASKRGLGDA SQAPIFIVGM PRSGSTLIEQ ILASHPQVFG AGERTEFGEA LVNCIRRDLD
DPLRIDIEAL EEVGAAPLRA LGVDYLRRMR NALPELQSRA QNDQRNPAAN YTHFTDKYPF
NFINLGLIHL ALPNARFIHS SRAPLPTCLS IFSRIFHDVP FSYDLGELGR YYRAYDALMA
HWQRVLPEGV MIEVKYEELV DDFEANVHRL LAHCGLEWDE RCLSFYQTAR QVNTASSAQV
RRPLYKTSLQ RWQPPRALLQ PLLDGLGSEL AAAHRHETGE VEASGTEHRS
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