Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1404 |
Symbol | |
ID | 6283377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 1571640 |
End bp | 1572518 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642620969 |
Product | Pirin domain protein |
Protein accession | YP_001895043 |
Protein GI | 187923401 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.160916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.121608 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGA CCCGCACGAT CGAACGCACG TTTCCGGCCG TTCGCACGAC CGAGGGTGGC GGCTTTATCG TCCACCGCCC GTTTCCGACC CGCCTGCTAA TGGACTTCGA TCCGTTCCTG CTGCTCGACG AAATGGGCCC GATCGACTAC GCGCCGGGCG AGGCGAAAGG CGCGCCGGAT CATCCGCATC GCGGCTTCGA AACAGTCACG TACGTGCTCG AGGGCGAGTT CGGCCACAAG GATTCGGCCG GCCATTCCGG CACCCTGCGC GCCGGCGACG TGCAGTGGAT GACCGCAGGC GCGGGCGTCG TGCACAGCGA GATGCCGGAC CCGTCGTTCG TCCGCACGGG CGGACGCGTG CACGGAATAC AGCTATGGGT GAATTTGCCG CGCCGCGACA AGATGATTGC GCCGCGCTAC CAGGAAATCC CGTCGGCGAG CATTCCCGTG GCGACGTCCG CGGACGGCAA GGTGCGCGTC AAGGTGATCG CCGGCGAAGC GCTCGGCGTC AAAGCGGCAA TCGAAACGCG TACGCCGATT CTGTATCAGC ATTTCTCGCT GCAACCGGGG GCCACGATCC GGCAACCGGT GCCGGCCGAC TATCGCGTGT TCGCCTATAG TTTGTCCGGC AAGGGCTTCT ATGGCGAAGG CGAAGCGCGT CAAGAAGTCG ACGCGCGGCA AATGGTTGTG TTTCAGAACG ATGGCGGCGC CGTGACGCTC ACGGCCGGCG CGGAGCCACT CGAGGTGCTG CTGCTAGGCG GCGTGCCGCT GAAGGAGCCC GTGGTGCGCT ACGGCCCGTT CGTGATGAAT ACGGAAGACG AGATTCGTCA GGCCGTCGTG GATTACCAGG CCGGGCGCAT GGGTGCGATC ACGCATTAA
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Protein sequence | MSTTRTIERT FPAVRTTEGG GFIVHRPFPT RLLMDFDPFL LLDEMGPIDY APGEAKGAPD HPHRGFETVT YVLEGEFGHK DSAGHSGTLR AGDVQWMTAG AGVVHSEMPD PSFVRTGGRV HGIQLWVNLP RRDKMIAPRY QEIPSASIPV ATSADGKVRV KVIAGEALGV KAAIETRTPI LYQHFSLQPG ATIRQPVPAD YRVFAYSLSG KGFYGEGEAR QEVDARQMVV FQNDGGAVTL TAGAEPLEVL LLGGVPLKEP VVRYGPFVMN TEDEIRQAVV DYQAGRMGAI TH
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