Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1267 |
Symbol | |
ID | 6281837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 1423113 |
End bp | 1424069 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642620826 |
Product | Spore coat U domain protein |
Protein accession | YP_001894906 |
Protein GI | 187923264 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0483759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.279584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGGC TCCTGCTGCT CCTCGCACTA TGCGCCCTGC TCGGCATCAT GCCGCGCCAC GTTAGCGCGC AGACCTGCAC GGCGAGTCCG TCGGCGCTAA GCTTCGGCAA CGTGAGCCCC ATCAGCCTCA GCGCCGTGGC CGCAACCGGC AGCGTCACGG TGCAATGCAC GTGGCCCGCG GTCACGCTGA CGCCGAGTGT GCAGGTGTGC CTGAACATGG GCGGCACGAC GCCGCGCCAT CTGAGCGCCG GCAGCAACCA GCTGCAATAC GATCTGTACC AGGACGCGGC GCATTCGCTC GCATGGGGCT CGAGCACGCT CGGCACGACG CCGATATCGC TGACGCTGGA GAAACCGGTG AGCGGCACGA CCGCCTCAGC GACGGTCAAT TTCTACGGCC AGATCGCCGC CAATCAGCCG GCCGTGCCGA CCACAGGTAA CAGCAGCACC AGTTATTCAC AGACGTTGAG CCAAACCTCT CTGACCTACG CCTTCTTTCT GCTGCTCGGG CCGACATGCG CCTCGCTGAC GACGAGCGCC GGCAGCTTCG GTTTCACCGT CAACGCAACG GTCGTCAACA ACTGCCTGAT CAGCGCGACG AACATCGCGT TCACGTCGAC GGGCGTGCTC AGCTCCGCAC TCAACGCGAC TGGCGCGATC ACGGCGCGCT GCACCAACGG CGACGCGTAC CGGATCGCGC TCAGCAGCGG CTCGAGCGGC AACGTCGCGG CCCGGCAGAT GCAGCGCTCA GGCGGCGGCG GCACGGTGAA TTACCAGCTC TACACGGATT CAGGCCACAC AAGCGCCTGG GGTGACGGCA CGGCCGGCAC CACGATGGCC ACCGGCACGG GTAGCGGCAA TGCCCTATCG ATCAACGTGT ATGGCCGCGT GCCGGCACAG AGCACTCCCA TGCCGGGCAG CTACAGCGAC ACGATCACCG CGACGATCAC TTTCTGA
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Protein sequence | MKRLLLLLAL CALLGIMPRH VSAQTCTASP SALSFGNVSP ISLSAVAATG SVTVQCTWPA VTLTPSVQVC LNMGGTTPRH LSAGSNQLQY DLYQDAAHSL AWGSSTLGTT PISLTLEKPV SGTTASATVN FYGQIAANQP AVPTTGNSST SYSQTLSQTS LTYAFFLLLG PTCASLTTSA GSFGFTVNAT VVNNCLISAT NIAFTSTGVL SSALNATGAI TARCTNGDAY RIALSSGSSG NVAARQMQRS GGGGTVNYQL YTDSGHTSAW GDGTAGTTMA TGTGSGNALS INVYGRVPAQ STPMPGSYSD TITATITF
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