| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0948 |
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| Symbol | |
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| ID | 6284168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1067492 |
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| End bp | 1068598 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642620508 |
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| Product | ImpA domain protein |
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| Protein accession | YP_001894591 |
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| Protein GI | 187922949 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03363] type VI secretion-associated protein, ImpA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGCA GCAAGAGACA AGCGACGGCG AAGGTGGCGG CGGTCAAGGC CGTCACACCC
CTGCCTCACG ACTGGATGTC ACCGGTCGAT GCCGCCGCCC CGTGCGGGGC CGACCTCGAA
TACGACCCGG AATTCGTCGT GCTGTCCGCG CAGATGGCGG TGAAAGTGGA CGCACAGTAC
GGCGACTTCG TGGGCATACC GGAACCCGTG AACTGGAGCG AGGTCGAGCG CGATTGCCGA
CGCCTGATGA TGCGCAGCAA GGACATGCGT CTCGCGGTGT GGTTCACGCG TTGCCGCACG
AGGCTCGCGG CAGGGGCGGG ACTGGCGGAA GGGCTGGGGC TGTTGGCCGC ATGGCTCGCC
GCGTTTCCCG GTGCGCTCCA TCCCCAGCCC GGTGTCGACG ACGATCAGGA AGCGGCGCTC
GAAATCCGCA TGAACGCTTT GCAGGCGTTG ACAGATTCGG ATGGATTGCT CTCTGACCTG
CGGGAGATCG CGTTGACGCG TTCGACCGCC ACGCGGCTTC AGATGCGCGA TGTCGAGCGC
GCGTTTGCAC ATCCGCGGCC GAGCGATGCG CTCGCGCCCG AGTCCGTTAC GCGGCAACTT
GAGGATCTGC GCATCCAGCA ACCGGACATG CTTCGGGGCT TCGATGACGC GCTCGCGAGC
CTGGAGTCCA TCGACGTTTG GTGCAAGGCG CATCTGGGCG TCTACTTGCC GGACCTCGCT
GCTCTCACGC GGCTGTTGCG GCGCGTAGTG GGAGATCGCT CGCGCGTGAC GGTGGCGCCG
GTTGACGGAT TGACGGAGGT GATGCCGTCC GACGATGCCG GTGCGGCGGC ATCGTCGAAC
GAGGAGACGC GCGTCGAGCA TGACGACATT TCGCCACCGG CCGGTTGCGC TGCGCCGGTT
AGCCTCGGCG TCAGCGTGGC AGCGGCGGGT CGTGAGGGCG CTTTGGAGCG TATTCGGGAA
GCTCGATACT GGTTCGAGCA ACACGAACCG AGCAGCCCAA TCCCCGTGTT GCTGAAGCGC
GCGGAACGGT TTGTGGGGAA ACGGTATGTG GATGTCGTCA AGGCCATTCC CACGGAGTTG
CTTGAACAAT GGGATAGCGA AGAGTAG
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| Protein sequence | MSSSKRQATA KVAAVKAVTP LPHDWMSPVD AAAPCGADLE YDPEFVVLSA QMAVKVDAQY
GDFVGIPEPV NWSEVERDCR RLMMRSKDMR LAVWFTRCRT RLAAGAGLAE GLGLLAAWLA
AFPGALHPQP GVDDDQEAAL EIRMNALQAL TDSDGLLSDL REIALTRSTA TRLQMRDVER
AFAHPRPSDA LAPESVTRQL EDLRIQQPDM LRGFDDALAS LESIDVWCKA HLGVYLPDLA
ALTRLLRRVV GDRSRVTVAP VDGLTEVMPS DDAGAAASSN EETRVEHDDI SPPAGCAAPV
SLGVSVAAAG REGALERIRE ARYWFEQHEP SSPIPVLLKR AERFVGKRYV DVVKAIPTEL
LEQWDSEE
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