| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0517 |
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| Symbol | |
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| ID | 6281258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 567642 |
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| End bp | 568712 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642620081 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001894166 |
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| Protein GI | 187922524 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.105133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.328539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTCC TTGAGATCGA AAATCTGCAT AAGTCCTTCG GGGCGAACAT TGCGCTGCAT
CACTTCGACA TGAAGATCGA GCGCGGCGAG TTCATTACTT TTCTCGGGCC GTCCGGTTGC
GGCAAGACGA CGGTGCTGCG CATGATCGCC GGCTTTGAAA CGCCGACGCG CGGCATCATC
CGGCTCGACA ATAAGGACGT GACCCACCTT CGCACGCGGC AGCGCAAGGT CGGCATGGTG
TTCCAGTCGT ATGCGCTTTT TCCGAACATG ACGGTGGCCG AGAACATCGG TTTCGGGCTG
AAGATCACGC ATCGGCCGCA GGCGGAGATC AACAGCCGCG TCGACGAGAT GCTGCAACTG
ATCAAGCTGC CGCATCTGGG CGGGCGCTAT CCGTGGCAAT TGTCGGGCGG CCAGCAGCAG
CGCGTGGCGC TCGCGCGCGC GCTCGCCGGC AAGCCGCAGG TGTTGCTGCT CGACGAACCG
CTCTCCGCAC TCGACGCCAA GATCCGTATC TCGTTGCGCC AGGACATTCG CGCATTGCAG
CGCGAACTCG GCATCACGTC GATTTTCGTC ACGCACGATC AGGAAGAGGC GCTGTCGATT
TCCGACCGCA TCGTCGTGAT GAACGAGGGC CGCGTCGAAC AGATCGGCTC GCCCTCGGAG
ATCTACAACT TTCCGCGCAC ACGCTTCGTC GCGTCGTTCG TCGGCACGCT GAATATTCTG
GCCGGGCATG TGGTGGATCC GGCGACCGGC AGGATGGTGG TGGACGGCCA GGAACTGACC
ACGACACAAG AACTGCCGTC GGACGATGCG GGCAAGAAGC GCCTGCTCGC GCTGCGGCCC
GAAGCGATCG TGCTGGAGCC GGCCGCGCCC GGCCGCAACA CGCTGAACGC CACCGTCGAA
GAAGTGAATT TCCTCGGCGC GGTGGTGCGC ATCAGAACCC GCGTGAAAGA CGCCGTGATT
TCTCTCGACG TATTCAACGA TCCGAATCGC GGTTTGCCCG AACGCGGGCA GCCGGTGTCG
CTCGGTTTCT CGCACGAGAA TCTGCTGGTG CTGGAAGAGG GCAGCGTTTA G
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| Protein sequence | MAFLEIENLH KSFGANIALH HFDMKIERGE FITFLGPSGC GKTTVLRMIA GFETPTRGII
RLDNKDVTHL RTRQRKVGMV FQSYALFPNM TVAENIGFGL KITHRPQAEI NSRVDEMLQL
IKLPHLGGRY PWQLSGGQQQ RVALARALAG KPQVLLLDEP LSALDAKIRI SLRQDIRALQ
RELGITSIFV THDQEEALSI SDRIVVMNEG RVEQIGSPSE IYNFPRTRFV ASFVGTLNIL
AGHVVDPATG RMVVDGQELT TTQELPSDDA GKKRLLALRP EAIVLEPAAP GRNTLNATVE
EVNFLGAVVR IRTRVKDAVI SLDVFNDPNR GLPERGQPVS LGFSHENLLV LEEGSV
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