Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0389 |
Symbol | |
ID | 6282114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 423297 |
End bp | 424589 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642619952 |
Product | General substrate transporter |
Protein accession | YP_001894038 |
Protein GI | 187922396 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCAG CGTCAAGGAG CCTTCATACG CGAGCCGTCG TCGCGGCTGT GATCGGCAAT GCACTCGAGT GGTACGACTT CACCGTGTTT GGTTTTCTGA CGGTGGTGAT CGCCCAGTTG TTCTTCCCGG CCGGCAACGA CTATTCGTCG TTGCTCCTCG CCACCGCGAC CTTCGGCGTC GCATTCGTCA TGCGGCCGAT CGGCGGCATC GTACTCGGAC TCTACGCGGA TCGCGCGGGA CGCAAAGCGG CGTTGTCGCT CGTCATCGCG CTGATGACGC TCGGCATTCT GTTGCTGGCG ATCGCACCGC CGTATTCCGC CATCGGCATC GGCGCGCCAT TGATGATCGT AGTCGGACGC TCGCTGCAAG GCTTTTCCGC CGGCGGGGAG TTCGGCAGTT CGACGGCGTT GTTGATTGAA GCAGCGCCGT TTTCGAAACG CGGCTTCTAC GGCAGTTGGC AGATGGCAAG CCAGGCGGCG GCGCTGCTGC TTGGCGCACT GGTGGGCGCC GCGATCACGC GCGGACTGTC GCCCGAGGCG TTGAAATCGT GGGGCTGGCG CGTGCCGTTC ATTCTGGGTT TGATCATCGG GCCGATCGGC TTTTACATCC GCTTGCATCT CGCGGATTCG GAAGCGTTTC TGCTCGCGCA AAAAACCGCG CGGCGCGCGA CGCTCGGCGA AGTGTTCAGA ACTCACGCCC GCGACGTGCT CTGCGGACTC GGCTCGGTGA TCGCACTCAC GGTGACGATT TACGTGCTGA TCAGCTATCT GCCGACCTTC GCGGTCAATC AACTCAAGTT GCCCTACGCG CAATCCTTTT ACGCGGTGAT CGTCGGCAAT CTGCTGTTGA CGGTGCTGTC GCCAGTGGCC GGCGCATGGT CGGACCGGAT CGGGCGCAAG GGGCTGTCGC TGTGGTCGCT GCTGATTACG CTCGTGATCA TCTATCCGCT GTTCGCGTGG CTCGCGGCGG AGCCGAGCGT GTCGAAACTG ATTCTCGTGC AGGCGCTGCT GTCGATTACG CTGTCCGGCT ATTACGGACC GTTCGGCGCG CTGATCGCGG AACTGTTTCC GGCAAACGTG CGTTCGACCG GTTTATCGCT CGCCTACAAC ATTGCGGTGA TGGTGTTCGG CGGCTTCGGG CCGTTTGTCG TGACGTGGCT GATCAACATC ACCGGCTCGC CGCTCGCACC GACTTACTAC GTGATGGGCG GACTCGCGCT GTCGATCGTC GCGGTGGCAT GCATTCCGGG GCAGCGTCAC GCGGATCTCG ACGCGCATCG CAAACCGGCC TGA
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Protein sequence | MTPASRSLHT RAVVAAVIGN ALEWYDFTVF GFLTVVIAQL FFPAGNDYSS LLLATATFGV AFVMRPIGGI VLGLYADRAG RKAALSLVIA LMTLGILLLA IAPPYSAIGI GAPLMIVVGR SLQGFSAGGE FGSSTALLIE AAPFSKRGFY GSWQMASQAA ALLLGALVGA AITRGLSPEA LKSWGWRVPF ILGLIIGPIG FYIRLHLADS EAFLLAQKTA RRATLGEVFR THARDVLCGL GSVIALTVTI YVLISYLPTF AVNQLKLPYA QSFYAVIVGN LLLTVLSPVA GAWSDRIGRK GLSLWSLLIT LVIIYPLFAW LAAEPSVSKL ILVQALLSIT LSGYYGPFGA LIAELFPANV RSTGLSLAYN IAVMVFGGFG PFVVTWLINI TGSPLAPTYY VMGGLALSIV AVACIPGQRH ADLDAHRKPA
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