| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0136 |
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| Symbol | |
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| ID | 6283911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 152710 |
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| End bp | 153918 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642619710 |
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| Product | pyridoxal-dependent decarboxylase, exosortase system type 1 associated |
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| Protein accession | YP_001893799 |
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| Protein GI | 187922157 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR03099] pyridoxal-dependent decarboxylase, exosortase system type 1 associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGA CTTTCCTCCA GCGCCCACCC GGGCTGCAGT TCAATGGTAT CGACGTGCGC
CAGCTGGCCG ACCGTGCCGG CCAGACACCC TTTTTCGCGT ACGACCGCTC GGCGATCGAC
ACCCGTGTGC GGGAATTGCG CAGCCTGCTG CCCTCCGCCA TGCAGCTGCA CTACTCGATC
AAGGCGAACC CGATGCCCGC CGTGATCCAC TACCTGGCCC AACGGGTCGA CGGGTTCGAT
GTTGCCTCCG CGCAGGAGAT GGCGCTGGCA CTCGATGCCG GTGCCACTCC CGACTCAATC
GGCTTTGCCG GGCCAGGCAA GTCTCACGAC GACCTGCGCC GCGCGGTCGC CAGCGGCGTC
AACGTTCACG TCGAGTCGGA TACCCAGTTG CGCCTTGTTA CCGCGCTCGG ATGGGAGCTT
GGCGTGCAGC CGAACGTGGT GATCCGCATC AATCCCGATT TTCAGGTCGG CCACAGCGGC
ATGCGCATGG GCGGCAGTGC GGCTCCGTTC GGCGTGGATG TCGACCAGAT TCCGGCATTG
CTGCACGAAC TCGAAACGCG GGAAGTCGCG CTCGCCGGTT TCCACGTCTT CTGGGGTTCG
CAGTGCCTGC ATGCCTCAAC CATCATCGAG GCCCAGCGCC AGAGCGTGGA TCTCATCCTT
CGGCTCGCCA GTGATCTGCC TCGACCACTA CGGTTCGTGA ACCTGGGTGG CGGCTTTGGC
ATCCCCTACT TTCCGGGCGA AACACCACTC GACACGAAGG TGGTCTGCGA AGCGATGCAC
GACTGGCTGC CCAGGCTTTG CGAACGTCTG CCCGGAACCA CGCCCATTCT GGAACTCGGG
CGTTATCTCG TAGGAGAGGC CGGCATCTAT GTGTGCCGTG TCATTGACCG GAAAGTCTCG
CGCGGCAGAA CATTCGTCAT CACGGACGGC GGACTGCATC ATCATCTGGC GGCTTCCGGC
AACTTCGGCC AGGTCCTGCG CCGCAACTTT CCGGTCGTGA TCGGCAACCG GCCAGACGGC
ATATCACGCG AGCGGTGTTA CGTGGTCGGG TGCCTCTGCA CGCCGCTCGA CCGCCTCGCG
GACGACGTTG AACTTCCCGA AGCGCACATC GGGGATTTCG TGGTGGTGAA GCAGTCGGGT
GCCTATGGCC ATTCGGCAAG TCCGGTGCAT TTCCTCAGCC ACCCGGAACC CGTCGAAATG
CTCGTGTGA
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| Protein sequence | MSLTFLQRPP GLQFNGIDVR QLADRAGQTP FFAYDRSAID TRVRELRSLL PSAMQLHYSI
KANPMPAVIH YLAQRVDGFD VASAQEMALA LDAGATPDSI GFAGPGKSHD DLRRAVASGV
NVHVESDTQL RLVTALGWEL GVQPNVVIRI NPDFQVGHSG MRMGGSAAPF GVDVDQIPAL
LHELETREVA LAGFHVFWGS QCLHASTIIE AQRQSVDLIL RLASDLPRPL RFVNLGGGFG
IPYFPGETPL DTKVVCEAMH DWLPRLCERL PGTTPILELG RYLVGEAGIY VCRVIDRKVS
RGRTFVITDG GLHHHLAASG NFGQVLRRNF PVVIGNRPDG ISRERCYVVG CLCTPLDRLA
DDVELPEAHI GDFVVVKQSG AYGHSASPVH FLSHPEPVEM LV
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