Gene Bphyt_5267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5267 
Symbol 
ID6279562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1446377 
End bp1446949 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content68% 
IMG OID642616353 
Producttranscriptional regulator, XRE family 
Protein accessionYP_001888996 
Protein GI187919965 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.782951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCA CACTCACCGA TGACAACGCC ATCGACCGCC GCATCGCCCA GCGGCTGCGC 
GCGTTGCGCG CCGAGCGCAA CTGGTCGCTC GACGAGCTCG CCAAACTCAG CGGCGTGAGC
CGCGCAACCT TGTCACGCCT CGAAAACGCC GCCGTGAGCC CGACGGCGAA CGTGCTCGGC
AAGCTCTGCG TGGCTTACGG ACTGCCGATG TCGCGCCTGA TGCACATGGT CGAGGAAGAT
TTCGCGCCGC TCGTGCCGCG CGCCGCCCAG CCGCTCTGGA CCGACGCCAG CGTCGGCTTC
CGGCGGCGCT CCGTGTCGCC GCCCGCGCAG GCGCTGAGCG GCGAGGCGCT CGAATGCGAA
CTCGACGCGG GCGTGCAGAT CGCCTACGAC GCGTCGCCGC GGCCTGGGCT CGAACATCAT
CTGATCCTGC TCGACGGAGA ACTGCAAATC ACCGTCGACG GCCAGAGCCA CGGCCTGCAA
CCGGGCGACT GCCTGCGCTA TCAACTGTTC GGTCCCAGCG CATTCGTGAC GCCCGCGCAT
AGCGGCGCCC GCTATCTTCT CTTTATCGTG TGA
 
Protein sequence
METTLTDDNA IDRRIAQRLR ALRAERNWSL DELAKLSGVS RATLSRLENA AVSPTANVLG 
KLCVAYGLPM SRLMHMVEED FAPLVPRAAQ PLWTDASVGF RRRSVSPPAQ ALSGEALECE
LDAGVQIAYD ASPRPGLEHH LILLDGELQI TVDGQSHGLQ PGDCLRYQLF GPSAFVTPAH
SGARYLLFIV