Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5267 |
Symbol | |
ID | 6279562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1446377 |
End bp | 1446949 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642616353 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_001888996 |
Protein GI | 187919965 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.782951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAACCA CACTCACCGA TGACAACGCC ATCGACCGCC GCATCGCCCA GCGGCTGCGC GCGTTGCGCG CCGAGCGCAA CTGGTCGCTC GACGAGCTCG CCAAACTCAG CGGCGTGAGC CGCGCAACCT TGTCACGCCT CGAAAACGCC GCCGTGAGCC CGACGGCGAA CGTGCTCGGC AAGCTCTGCG TGGCTTACGG ACTGCCGATG TCGCGCCTGA TGCACATGGT CGAGGAAGAT TTCGCGCCGC TCGTGCCGCG CGCCGCCCAG CCGCTCTGGA CCGACGCCAG CGTCGGCTTC CGGCGGCGCT CCGTGTCGCC GCCCGCGCAG GCGCTGAGCG GCGAGGCGCT CGAATGCGAA CTCGACGCGG GCGTGCAGAT CGCCTACGAC GCGTCGCCGC GGCCTGGGCT CGAACATCAT CTGATCCTGC TCGACGGAGA ACTGCAAATC ACCGTCGACG GCCAGAGCCA CGGCCTGCAA CCGGGCGACT GCCTGCGCTA TCAACTGTTC GGTCCCAGCG CATTCGTGAC GCCCGCGCAT AGCGGCGCCC GCTATCTTCT CTTTATCGTG TGA
|
Protein sequence | METTLTDDNA IDRRIAQRLR ALRAERNWSL DELAKLSGVS RATLSRLENA AVSPTANVLG KLCVAYGLPM SRLMHMVEED FAPLVPRAAQ PLWTDASVGF RRRSVSPPAQ ALSGEALECE LDAGVQIAYD ASPRPGLEHH LILLDGELQI TVDGQSHGLQ PGDCLRYQLF GPSAFVTPAH SGARYLLFIV
|
| |