| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4103 |
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| Symbol | |
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| ID | 6278973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 143071 |
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| End bp | 143988 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642615204 |
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| Product | 5-dehydro-4-deoxyglucarate dehydratase |
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| Protein accession | YP_001887857 |
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| Protein GI | 187918826 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCAC CTCAAGAACT CAAAGCCATC GTTTCCGAAG GGCTGCTGTC CTTTCCCGTG
ACCGACTTCG ACGCGCACGG CGAGTTTCGC GCCGACACCT ATGCTGCGCG CCTCGAATGG
CTCGCGCCCT ACGGCGCGAC CGCGCTGTTC GCCGCGGGCG GCACGGGTGA ATTCTTCTCG
TTGACGAAAA CCGACTACAC GAACGTGATC CGCACGGCGA CCGACACCTG CCGAGGCAAG
GTGCCGATTC TCGCGGGCGC GGGCGGCCCG ACGCGCGTGG CGATCGAATA CGCGCAGGAA
GCCGAACGTC TCGGCGCAAG CGGCGTGTTG CTGATGCCGC ATTATCTGAC CGAAGCGTCG
CAGGAAGGCA TCGCGGCGCA CGTGGAGCAG GTGTGCAAGT CCGTGCCGAA CATTGGCGTG
ATCGTCTACA ACCGCGCCAA TTCGAAGCTG AACGCGGACA TGCTCGAACG TCTCGCGGAC
CGCTGCCCGA ATCTGATCGG CTTCAAGGAT GGCGTGGGTG AAATCGAAGC GATGGTGACG
ATTCGCCGTC GGCTGGGCGA GCGTTTCTCG TATCTCGGCG GCCTGCCGAC CGCGGAAGTC
TATGCGGCGG CGTATAAGGC GCTGGGTGTG CCGGTATATT CATCGGCGGT GTTCAACTTC
ATTCCGAAGA CGGCGATGGA GTTTTATCGC GCGGTCGCCG CCAATGATCA CGCAACGCAA
GGCAGGCTGC TCGACGAATT CTTCCTGCCG TATCTGGCGA TCCGGAATCG TCGCGCGGGT
TACGCGGTGA GCATCGTGAA GGCGGGCGCG AAACTGGTGG GCCACGACGC CGGTCCGGTC
CGCGCACCGC TGACCGATTT GACCGATGAA GAGTCGGCGC AACTCGACGC GCTGATTAGA
AAGCTCGGCG CGCAGTAA
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| Protein sequence | MTSPQELKAI VSEGLLSFPV TDFDAHGEFR ADTYAARLEW LAPYGATALF AAGGTGEFFS
LTKTDYTNVI RTATDTCRGK VPILAGAGGP TRVAIEYAQE AERLGASGVL LMPHYLTEAS
QEGIAAHVEQ VCKSVPNIGV IVYNRANSKL NADMLERLAD RCPNLIGFKD GVGEIEAMVT
IRRRLGERFS YLGGLPTAEV YAAAYKALGV PVYSSAVFNF IPKTAMEFYR AVAANDHATQ
GRLLDEFFLP YLAIRNRRAG YAVSIVKAGA KLVGHDAGPV RAPLTDLTDE ESAQLDALIR
KLGAQ
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