Gene SbBS512_E1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1250 
Symbol 
ID6268988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1148166 
End bp1148873 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content49% 
IMG OID641725375 
Producthypothetical protein 
Protein accessionYP_001879889 
Protein GI187732840 
COG category[S] Function unknown 
COG ID[COG3646] Uncharacterized phage-encoded protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00000878472 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCG CAATTTTTAA CGGCAAAGCA TCCATGACCA GCGTTGAGAT CGCAGAGCTG 
GTGGGAAGCC GACCAGATAG TGTTAAGAGA ACTATTGAAA CACTGGCTAA AAAGGGAATC
ATCCAATTTC CACAGACTGT GGAAATTGAG AATAAACAAT CACTTGGGCC TCGCCGATTT
TCTAGCGCGT ATGTATTCGA AGGTGAACGA GGTAAGCGCG ACAGCATCAT TGTCGTCGCA
CAGCTCTGTC CTGAATTCAC AGCTCGCCTG GTAGATCGCT GGCGCGAACT GGAAGAACAG
ATCCGTAAGC CAATGAGCGA AATCGAAATG GTTGCCGCGA TGGCTCTTGA AGCCGTTCGC
CAACAGAAAC GGATCACTCA GGTGGAAGAA AAAGTCAGCC ACGTTGCTGA AACAGTCGAG
CAAATTAAAA AGGGCACTAT TCGTGAGGGC TATGCCGGAT ATCGCCAACT GAAAGCAAAA
ACCGGTTTGT CAGATGATAA ATGCCGCAAT CTGGTGAACG CCTATCAAAT TCCTACAGAC
ACCCATGAGT TCATGACGCC GGACAGATTG TTGCCACGTC GCGCAATTGT TGCTGTGGAA
CCGTTTATGG CTGCTTTTTA TCGGGTTATG GAGGAAGCAG AACCGCGAGG GACTCGCTGG
TATCACCCGA AAATGGGGTT ATTTCAGGTT ATTGGTTGGC AGCGGTGA
 
Protein sequence
MNTAIFNGKA SMTSVEIAEL VGSRPDSVKR TIETLAKKGI IQFPQTVEIE NKQSLGPRRF 
SSAYVFEGER GKRDSIIVVA QLCPEFTARL VDRWRELEEQ IRKPMSEIEM VAAMALEAVR
QQKRITQVEE KVSHVAETVE QIKKGTIREG YAGYRQLKAK TGLSDDKCRN LVNAYQIPTD
THEFMTPDRL LPRRAIVAVE PFMAAFYRVM EEAEPRGTRW YHPKMGLFQV IGWQR