12 homologs were found in PanDaTox collection
for query gene SbBS512_E1250 on replicon NC_010658
Organism: Shigella boydii CDC 3083-94



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010658  SbBS512_E1250  hypothetical protein  100 
 
 		 235 aa  486  1e-136  Shigella boydii CDC 3083-94  Bacteria  decreased coverage  0.00000878472  n/a   
 
 
-
 
NC_011353  ECH74115_2913  Roi protein  64.29 
 
 		 240 aa  135  8e-31  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.00203388  hitchhiker  0.00000000000553867 
 
 
-
 
NC_011353  ECH74115_3542  DNA-binding protein Roi  67.71 
 
 		 240 aa  125  5e-28  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.206304  hitchhiker  0.00000000735314 
 
 
-
 
NC_010465  YPK_1198  putative DNA-binding protein (Roi)  57.94 
 
 		 275 aa  124  1e-27  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_3359  phage-encoded protein-like  38.34 
 
 		 259 aa  103  2e-21  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_2408  phage-encoded protein-like  38.02 
 
 		 254 aa  99  6e-20  Nitrobacter hamburgensis X14  Bacteria  normal  0.665477  n/a   
 
 
-
 
NC_008687  Pden_3775  hypothetical protein  54.44 
 
 		 271 aa  83.6  0.000000000000003  Paracoccus denitrificans PD1222  Bacteria  decreased coverage  0.000000000361227  hitchhiker  0.000220505 
 
 
-
 
NC_010468  EcolC_1227  hypothetical protein  31.45 
 
 		 200 aa  67.4  0.0000000002  Escherichia coli ATCC 8739  Bacteria  normal  0.581429  normal  1 
 
 
-
 
NC_003912  CJE1435  DNA-binding protein Roi  33.8 
 
 		 243 aa  52.8  0.000004  Campylobacter jejuni RM1221  Bacteria  normal  1  n/a   
 
 
-
 
NC_009707  JJD26997_0306  DNA-binding protein Roi  33.93 
 
 		 247 aa  51.2  0.00001  Campylobacter jejuni subsp. doylei 269.97  Bacteria  hitchhiker  0.000000394975  n/a   
 
 
-
 
NC_009707  JJD26997_1112  DNA-binding protein Roi  33.93 
 
 		 247 aa  51.2  0.00001  Campylobacter jejuni subsp. doylei 269.97  Bacteria  hitchhiker  0.000052914  n/a   
 
 
-
 
NC_013421  Pecwa_0869  Phage regulatory protein, Rha-like protein  30.28 
 
 		 231 aa  42.4  0.007  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
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