| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0055 |
|---|
| Symbol | araB |
|---|
| ID | 6269845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 59412 |
|---|
| End bp | 61112 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641724314 |
|---|
| Product | ribulokinase |
|---|
| Protein accession | YP_001878874 |
|---|
| Protein GI | 187733621 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1069] Ribulose kinase |
|---|
| TIGRFAM ID | [TIGR01234] L-ribulokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATTG CAATTGGCCT CGATTTTGGC AGTGATTCTG TGCGAGCTTT GGCGGTGGAC
TGCGCCAGCG GTGAAGAGAT CGCCACCAGC GTAGAGTGGT ATCCCCGTTG GCAAAAAGGG
CAATTTTGTG ATGCCCCGAA TAACCAGTTC CGTCATCATC CGCGTGACTA CATTGAGTCA
ATGGAAGCGG CACTGAAAAC CGTGCTTGCA GAGCTTAGCG TCGAACAGCG CGCAGCTGTG
GTCGGGATTG GCGTTGACAG TACCGGCTCG ACGCCCGCAC CGATTGATGC CGACGGTAAC
GTGCTGGCGC TGCGCCCGGA GTTTGCCGAA AAACCAAACG CGATGTTCGT ATTGTGGAAA
GACCACACTG CGGTTGAAGA AGCGGAAGAG ATTACCCGTT TGTGCCACGC GCCGGGCAAC
GTTGACTACT CCCGCTACAT TGGTGGTATT TATTCCAGCG AATGGTTCTG GGCAAAAATC
CTGCATGTGA CTCGCCAGGA CAGCGCCGTG GCGCAATCTG CCGCATCGTG GATTGAGCTG
TGCGACTGGG TGCCAGCTCT GCTTTCCGGT ACCACCCGCC CGCAGGATAT TCGTCGCGGA
CGTTGCAGCG CCGGGCATAA ATCTCTGTGG CACGAAAGCT GGGGCGGCTT GCCGCCAGCC
AGTTTCTTTG ATGAGCTGGA CCCGATCCTC AATCGCCATT TGCCTTCCCC GCTGTTCACT
GACACCTGGA CTGCCGATAT TCCGGTGGGC ACCTTATGCC CGGAATGGGC GCAGCGTCTC
GGCCTGCCTG AAAGCGTGGT GATTTCCGGC GGCGCGTTTG ACTGCCATAT GGGCGCAGTT
GGCGCAGGCG CACAGCCTAA CGCACTGGTA AAAGTTATCG GTACTTCCAC CTGCGACATT
CTGATTGCCG ACAAACAGAG CGTTGGCGAG CGGGCAGTTA AAGGTATTTG CGGTCAGGTT
GATGGCAGCG TGGTACCTGG ATTTATCGGT CTGGAAGCAG GCCAATCGGC GTTTGGTGAT
ATCTACGCCT GGTTTGGTCG CGTACTCGGC TGGCCGCTGG AACAGCTTGC CGCCCAGCAT
CCGGAACTGA AAGCGCAAAT CAACGCCAGC CAGAAACAAC TGCTTCCGGC GCTGACCGAA
GCATGGGCCA AAAATCCGTC TCTGGATCAC CTGCCGGTGG TGCTCGACTG GTTTAACGGC
CGCCGCACAC CGAACGCTAA CCAACGCCTG AAAGGGGTGA TTACCGATCT TAACCTCGCT
ACCGACGCTC CGCTGCTGTT TGGCGGTTTG ATTGCTGCCA CCGCCTTTGG CGCACGCGCA
ATCATGGAGT GCTTTACCGA TCAGGGGATC GCCGTCAATA ACGTGATGGC GCTGGGCGGC
ATCGCGCGGA AAAACCAGGT CATTATGCAG GCCTGCTGCG ACGTGCTGAA TCGCCCGCTG
CAAATTGTTG CCTCTGACCA GTGCTGTGCG CTCGGTGCGG CGATTTTTGC TGCCGTCGCC
GCGAAAGTGC ACGCAGACAT CCCATCAGCC CAGCAAAAAA TGGCCAGTGC GGTAGAGAAA
ACCCTGCAAC CGCGCAGCGA ACAGGCACAA CGCTTTGAAC AGCTTTATCG CCGCTATCAG
CAATGGGCGA TGAGCGCCGA ACAACACTAT CTTCCAACTT CCGCCCCGGC ACAGGCTGCC
CAGGCCGTTC CGACTCTATA A
|
|---|
| Protein sequence | MAIAIGLDFG SDSVRALAVD CASGEEIATS VEWYPRWQKG QFCDAPNNQF RHHPRDYIES
MEAALKTVLA ELSVEQRAAV VGIGVDSTGS TPAPIDADGN VLALRPEFAE KPNAMFVLWK
DHTAVEEAEE ITRLCHAPGN VDYSRYIGGI YSSEWFWAKI LHVTRQDSAV AQSAASWIEL
CDWVPALLSG TTRPQDIRRG RCSAGHKSLW HESWGGLPPA SFFDELDPIL NRHLPSPLFT
DTWTADIPVG TLCPEWAQRL GLPESVVISG GAFDCHMGAV GAGAQPNALV KVIGTSTCDI
LIADKQSVGE RAVKGICGQV DGSVVPGFIG LEAGQSAFGD IYAWFGRVLG WPLEQLAAQH
PELKAQINAS QKQLLPALTE AWAKNPSLDH LPVVLDWFNG RRTPNANQRL KGVITDLNLA
TDAPLLFGGL IAATAFGARA IMECFTDQGI AVNNVMALGG IARKNQVIMQ ACCDVLNRPL
QIVASDQCCA LGAAIFAAVA AKVHADIPSA QQKMASAVEK TLQPRSEQAQ RFEQLYRRYQ
QWAMSAEQHY LPTSAPAQAA QAVPTL
|
|---|
| |