| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1561 |
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| Symbol | |
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| ID | 6273684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1875070 |
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| End bp | 1878234 |
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| Gene Length | 3165 bp |
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| Protein Length | 1054 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642613621 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001878163 |
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| Protein GI | 187736051 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCCC TGACCAACAT GCTGATCTCC GCTTCCGCCG GAACGGGAAA AACCTACCAG
CTCTCCCTGC GTTTCCTGGG GTTGCTGGCG CTGAACAGCG GCAACCACCC CGAACGCCTC
ATCGCCATTA CGTTCACCCG AAAAGCGGCG GGAGAATTCA AGGACCGCAT TCTGACAGAC
CTGGCCGCGG GGGCCACGGA TGAGGCAGGC GCGGCGCGGC TGAAAGAACG GCTCTGGGCG
GTTATCAAGG GAACGGACGG GGAGCCCGGT CTCTGGCCCG GCGCTCCGGA GGCATGGAAG
GAGGAAAATC TGCATCGGGA ACGCTTCCTC CATTTACTGC ACATCCTGGT ACAGAATTTG
GCGCGACTCA ACCTCTGCAC CATTGACAGC CTGTTTGCCC AAATTGCCTC CGCCAGCACC
TTTGAGCTGG GAGTCAGCGG CTTCAGTATG ATTGACCCCA CGGCGGAGAA ACTGGCGCGC
CGTGAAGCCC TGCTCTCCCT GTACCGGGAA TGCTCCGTAA ACAAAGAGCG AAGGAAGGAT
TTTGAAGACG CTTTCCTTTC CGGGGCGGAT TCTGACGCGG AAGCCGCAGA CGCGGAGAAA
TCCATGATGC GCCGCCTGGG CACCTATCAC GAACTTTTTC TGGATGTGCC GGATGCCGGG
ATGTGGGGAA ACCCCGTCAC GCTGGGCTTC ACACCGGAGG AGCTGGCGCC TCCCGTCTCT
CTGGAACAAT TTGATTCCGT CCTTCATTCC CTGATTTTCC AGGTTCAGCA AACTCCTGCG
TCGGAAGGGA AAAACGGCGT AAAAAACAAA GAACTGTTCC TGCGCTTCCT GAACGGATTT
TCCCAATACG CCAGGCTGGG CCGCGTGCGA TTCCGTACAG AGGGTGGTTC CGCCTGGGCT
ATTACCGTGG AAGAGGCGCG GGAAAAATTC CGGGATTTCT GGACGCCTGC TCTGGAAGAA
CTCATCCAAA GCTGGCTTCG CATGGAAACC CTGCACACGC TGCGCCGAAC CCGCGCCACG
CACGGGCTGA TGCTCCTGTT TGAGAACAAA TATTCCTCCC TGGTCCGCAA CAGGGGGAGA
TTCCTGTTCC ACGACGTTAC GCGCATGCTG GGAGGGGGCA CCATGACGCC GGAACTCAAA
CGGGACCTGC AATACCGCAT GTACTGCCGT TATGACCATT GGATGCTGGA TGAATTCCAG
GATACGTCCC AGCCCCAATG GCACGTCATC AAGCCTTTTC TGGATGATCT GGCGGAATCC
AAGACTGGAA ATGAAGGCAG CATTTTCGTG GTGGGGGACA TCAAGCAGAG CGTGTACCAA
TGGCGCGGCG GAGACCCGGA GCTTTTCCGC TCCGTTTCTT CACAGCTTCA ACTGGAACAA
CGCGGCATGT CCACTTCCTA CCGTTCTGTC CAGCCAGTGC TGGACCTGGT CAACGATATT
TGCGACTATG CCCGGACAGC GCCCGGGTGC GAACCCGCCG CCCTGGAACA GTGGGGAGAA
TATCCGGCGC ACCGGTGCGC CCCTCATCTG GAAGACCGTC CCGGCACCTC CCAAATCTGG
CAGGCGCCCA AGGCGGAAAA CGTCTCCGCC AACGACCAGG TATGCCAGGC GGCGGCCGAT
ATTCTGGAGC GTACAGGGGC CCTGCGCCGC GGCCTGGAAA CAGCGATACT GGTCAGTACG
AAAAACCAGG CTCTTGTCAT CAAGGGCTGG CTGACGGACC ACGGCATCCC CGCAGAAGTA
TGTGACGACG TTCCAGTAGG TGTGGACTCT CCGCTGGGAA AAAACCTGCT GTACTTCTTC
CGCTGGCTGC TGATGCCGGG AGACCCCTTT GTCGTCGGCC TGCTCACCCA CTCCCCTCTC
CGGCCCCTCA TCACGCAGGG AGGCCCGGAA AGCATGGGGT GGAAGGAATG GCGCCTCCTG
CTGGAACGGG ACGGTTACGC CGCCGTCATG GAGGAACTGG AACAGCGCCT GCTCCGGGGA
GGGACGGAAC TGACGGACTT CCACCGCGAC CGCCTGGCCG TCTGGCAGAA TGAGGCGGAA
CAGGTGGACG AACAGGGCGT TTCCCTGGAT GAATGGATCA GGCGCATGGA AGACCTGACC
CGCCGGGAAG ACCCCGCCGC GGGAATTGTC CGAATCATGA CCATCCACAA ATCCAAAGGG
CTGGGATTTG ACATCGTCAT CCTGCCCCAG ATCGGCAGGG ATACACCTTT TGCGGACGGA
AGGCATCTGA CCCATTTTAT CAAAAAAAAC GGGGAGGGCG GTGTGGAAGG CATTGTCCTG
GCCCCCTCCC GGCATGTCTA TATGAATATC CCGCAATTCC GGGAACTTTA CGGGGAATGG
CGCGCCCGGC AGCAATTCGA CGGATTCTGC AAGCTGTATG TGGCGCTTAC CCGGGCCAAG
CGGGCTACCT ACGTTATCCT CCCGTACCGG GAAGACAAGG AAGAAACGGA GGCAGATTCC
ATGTGGAAAG TAGTCCGTTC CTCTATCCGG CCCCTCAACC GGGGAACGGA AGACATACTT
CCGGAATCCG GAGCGTCATG CCTGTACTCC CGCGGTCTTG ACGGGTGGTA TGAGGAATTC
CCGGAAAGCA TACAAAAACG CGCGGAGAAA AACGCGCTGG AATGGCCTCC GCAAAAACCG
TTGGCCAGAG AACGGATATC CCCTTCCGGC CTGTCGGAGG AAGCCTCCCC GCTCCAGGGA
GAAAAACACG CGGGCGCAGG GAAAGCCGCC GCGCTTGGTT CCGCCGTCCA CGCCGTGTTT
GAACGGATTA CCCGCTGGGA TGATGAAAAC AAACCGGCGT GGGCTCTCCA CCCTGCCACG
GAGGCGGAAC GCATCGTAGC GGAGTGCATG GAAATCCCAT CCATCCGCGA ACTTTTCACG
CCTCCGGAAA CGGCGCGCAT CATGAAGGAA CAGCGTATTG AAGCCATTGA CGGGAATAAC
TGGATTTCCG GCATCATTGA CAGGCTGATT CTTGATGGAG ACGGCGCCCG CATCGTGGAC
TTCAAGACGG ACCATGCCGA TACCCCTGAG CAACTGCGCG AGCACCATGC AAACCAATTG
AACGCTTACG CCCGCATCGT ATCCAGAATC ACCGGAATAC CGCTGGAGCG CATTACGCGC
ACTATCGTCT CCACCTGCTT GAAGGAAACC GTCCCCATTC AATAA
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| Protein sequence | MPPLTNMLIS ASAGTGKTYQ LSLRFLGLLA LNSGNHPERL IAITFTRKAA GEFKDRILTD
LAAGATDEAG AARLKERLWA VIKGTDGEPG LWPGAPEAWK EENLHRERFL HLLHILVQNL
ARLNLCTIDS LFAQIASAST FELGVSGFSM IDPTAEKLAR REALLSLYRE CSVNKERRKD
FEDAFLSGAD SDAEAADAEK SMMRRLGTYH ELFLDVPDAG MWGNPVTLGF TPEELAPPVS
LEQFDSVLHS LIFQVQQTPA SEGKNGVKNK ELFLRFLNGF SQYARLGRVR FRTEGGSAWA
ITVEEAREKF RDFWTPALEE LIQSWLRMET LHTLRRTRAT HGLMLLFENK YSSLVRNRGR
FLFHDVTRML GGGTMTPELK RDLQYRMYCR YDHWMLDEFQ DTSQPQWHVI KPFLDDLAES
KTGNEGSIFV VGDIKQSVYQ WRGGDPELFR SVSSQLQLEQ RGMSTSYRSV QPVLDLVNDI
CDYARTAPGC EPAALEQWGE YPAHRCAPHL EDRPGTSQIW QAPKAENVSA NDQVCQAAAD
ILERTGALRR GLETAILVST KNQALVIKGW LTDHGIPAEV CDDVPVGVDS PLGKNLLYFF
RWLLMPGDPF VVGLLTHSPL RPLITQGGPE SMGWKEWRLL LERDGYAAVM EELEQRLLRG
GTELTDFHRD RLAVWQNEAE QVDEQGVSLD EWIRRMEDLT RREDPAAGIV RIMTIHKSKG
LGFDIVILPQ IGRDTPFADG RHLTHFIKKN GEGGVEGIVL APSRHVYMNI PQFRELYGEW
RARQQFDGFC KLYVALTRAK RATYVILPYR EDKEETEADS MWKVVRSSIR PLNRGTEDIL
PESGASCLYS RGLDGWYEEF PESIQKRAEK NALEWPPQKP LARERISPSG LSEEASPLQG
EKHAGAGKAA ALGSAVHAVF ERITRWDDEN KPAWALHPAT EAERIVAECM EIPSIRELFT
PPETARIMKE QRIEAIDGNN WISGIIDRLI LDGDGARIVD FKTDHADTPE QLREHHANQL
NAYARIVSRI TGIPLERITR TIVSTCLKET VPIQ
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