Gene Amuc_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1235 
Symbol 
ID6275852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1483681 
End bp1484076 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content54% 
IMG OID642613292 
Productribosomal protein S9 
Protein accessionYP_001877841 
Protein GI187735729 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.026641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.24615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGA CAACCCCATA CAACGCCACC GGCCGTCGTA AGACCGCCAT TGCACACGCT 
TGGCTTACTG AAGGTTCCGG CCGCATCACG ATCAACCGCC GCGGTTTTGA GGAATATCTT
CCTACCGTTC AGTTGCAGAA TGCTGTTCTT CAGCCCTTTC AGGTTACCAA TACCATGAAC
AAGTTTGATG TGAACGTCGT TACCAAGGGC GGCGGTATTC ACGGACAGGT GGGAGCCATT
CGCATGGCGA TCGCCCGTGC TCTCGTTCAG GTTGATGAAG CTTCCCGTTC CCAGCTTCGT
GAATTCGGTC TTCTGACCCG TGATTCCCGC ATGAAGGAAC GTAAAAAGCC CGGTCGTCCT
GGAGCCCGCA AGCGTTATCA GTTCTCCAAG CGTTAA
 
Protein sequence
MSQTTPYNAT GRRKTAIAHA WLTEGSGRIT INRRGFEEYL PTVQLQNAVL QPFQVTNTMN 
KFDVNVVTKG GGIHGQVGAI RMAIARALVQ VDEASRSQLR EFGLLTRDSR MKERKKPGRP
GARKRYQFSK R