| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0377 |
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| Symbol | |
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| ID | 6274865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 451218 |
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| End bp | 451892 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642612428 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_001876997 |
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| Protein GI | 187734885 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.294343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTTCTA CCCGCAAATC CCAGTCCGAC CGTTCTGCGG AAACCAGCGG CAAAATCCTC
CGTGCTGCAC AGAAGCTTTT TGCCCTCAGG GGATTTAATG GCGTGACCAT GAGGGCGGTC
GCTTCTGAAG CAGGAGTTAA TCTGGCTTCT ATCGTTTACT ATTTTGAGAA TAAGGAGGGA
CTGTATCTGG CTGTTTACAG ACAATATGCG GAACCTCTGA TGAAAGCGCG CATGAAGATG
CTGAAAGAGG CGGATCTTCA TCCGTCCCTG AGGGCGTATG CCCGTGCATT TATAGAACCT
GCTTTCCGGC TATTTCTGGA TGAGAGCCTG GGAGGGCCGG ATCATGTCCG TTTATTGTGG
CGTTTGCCGC AGGAGCCGGA ATATCTGGGA AGAAAAATCT ATGATGAATT TTATGCTCCA
TCTATCCAGG AGATGATAGC AAGAATTCGG AGATTCTGTC CGTGGGATGA TGAGCTTTCC
TTATCTTGGC ATGCGCATAT CATGAGTTCC ATCTTCCATG CTACGTTGGG GAAATATGTC
GCGTGCATGG ATCTTCAAGA AAAGGAACCG TGGATGAAGG ATCAGGAGCA CATTTTGCAG
ATGATTGTGA ATACCGCCGT TTTTCTGATC TCCCGTCCGG CTCTGTCTCC GGAGGAAGAG
GAAAGGCAGG GATAA
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| Protein sequence | MSSTRKSQSD RSAETSGKIL RAAQKLFALR GFNGVTMRAV ASEAGVNLAS IVYYFENKEG
LYLAVYRQYA EPLMKARMKM LKEADLHPSL RAYARAFIEP AFRLFLDESL GGPDHVRLLW
RLPQEPEYLG RKIYDEFYAP SIQEMIARIR RFCPWDDELS LSWHAHIMSS IFHATLGKYV
ACMDLQEKEP WMKDQEHILQ MIVNTAVFLI SRPALSPEEE ERQG
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