Gene Amuc_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0019 
Symbol 
ID6275220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp24455 
End bp25414 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content59% 
IMG OID642612059 
Producthypothetical protein 
Protein accessionYP_001876647 
Protein GI187734535 
COG category[R] General function prediction only 
COG ID[COG2234] Predicted aminopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCCC GCATGCATCC CTCCGCCTTC CTGTCTTCCG GATTCCTGCT GCTGTCCACC 
GGTCTTTCCT CCTGCACATT TCTTCCCATG TTTTCCTCCG GAGGGCAGGA AACGCCGCGG
ACCCTGGGCG CACGCATGGA AAAACACACG GAAGTCCTGC AAAAAGACAT CGGGGAAAGA
AACGCCAGCC AGCCCAAATC CATGGAAGCC GCCGCCAAAT ACATCGCCGG GAATTTCTCG
GACATGGGGT ACGCCGTCAC CATGCAGCCC GTATCCGGAG GAAACGTGAA AAAAGGAGCG
GCCATTTACA ACATCCTGGT TTACAAGCCC GGCCTGTATT CCAACAATCA AAGCATCGTC
GTGGGAGCCA ATTATGATTC CAGCGGACAG CGCAACAACG GCAGCGGAAC GGCCCTGCTG
CTGGAGACGG CGAGAGGCCT GAAAGACATC CCCACCAATC ACAATATCTA TTTTGTCGCA
TACGCGAACG GAGCGGAGCC CGCAGGGAAA TCCATCTCTT CCGGAGCCTG CGTGCATGCC
AGCACCCTAA GCGGCAGCAT TGGAGCAACC AACATCCTGG GCATGATCAA TCTGGAACCC
CAGAAGCTGG ATGCCGGAGG GGAACGAAAA CAGCCGGGCC CGGAATCCTC CCGGGAAGCC
GTTCTGTTCA CGACCACCCC GCACGGCAAG AAATTTGCTG GCCAGTGCGC CGCCCCCTTC
GCCAAATCCT GGGAGCAGGC GCCCGCTACC TTCCACCGGG AACCTTCCGC CCTCACAGGC
AATGACCGCC ATTACGCGGT CCTGGGCATT CCCACGGTCT CCTGCCGGAG CAAGTATCCC
GTCACGGATG CCCGTACGGA AGAGTATGTG CAGGCGCTGA CGGACATGAT TCACCAGGTA
GCGGACAACG ACGCGCCCGA ACCGGCAAAA AACGCCGGCC AGGGCGAGAA AGCATCCTGA
 
Protein sequence
MMPRMHPSAF LSSGFLLLST GLSSCTFLPM FSSGGQETPR TLGARMEKHT EVLQKDIGER 
NASQPKSMEA AAKYIAGNFS DMGYAVTMQP VSGGNVKKGA AIYNILVYKP GLYSNNQSIV
VGANYDSSGQ RNNGSGTALL LETARGLKDI PTNHNIYFVA YANGAEPAGK SISSGACVHA
STLSGSIGAT NILGMINLEP QKLDAGGERK QPGPESSREA VLFTTTPHGK KFAGQCAAPF
AKSWEQAPAT FHREPSALTG NDRHYAVLGI PTVSCRSKYP VTDARTEEYV QALTDMIHQV
ADNDAPEPAK NAGQGEKAS