Gene Bphy_5533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5533 
Symbol 
ID6247016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2687189 
End bp2687632 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content64% 
IMG OID642597252 
ProductNUDIX hydrolase 
Protein accessionYP_001861655 
Protein GI186474313 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00579175 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGCACGC GCATTCTGCT GGTTGGCAAG GCGAACTCCC GCTGGTCGCT GCCAGGCGGC 
AAACCCGACA CCGGCGAGAC ATTCGAAGCC GCCGCCGTGC GCGAACTCAT GGAAGAAACG
AGCCTTCAGG CGGCAGGCAT GCAGTATCTG TTCGAGTTCG CGGGCACGCG GACCTGCCAT
CATGTCTTCG CCGCTCATGT CGACGAACAG CAAACCGCCA CGCCAAGCAA CGAAATCACG
CGCTGTACGT GGGCCAAAGT CACCGACATC TCCGATCTCG ACACAAGCGT CTCGACGCGC
GGCATCGTCG ACGTGCTCGC GTTGAACCGC AGCTATGACC CGCGCGTGCG GAACCGCTAT
CAGCGCGCGG ACGCGTTCGT GCAAAACCTG CGCGAAGCGT TGCGGGATGT GCGCTTGCGG
GGGTGGACGA CGGCGCTGTG GTAA
 
Protein sequence
MGTRILLVGK ANSRWSLPGG KPDTGETFEA AAVRELMEET SLQAAGMQYL FEFAGTRTCH 
HVFAAHVDEQ QTATPSNEIT RCTWAKVTDI SDLDTSVSTR GIVDVLALNR SYDPRVRNRY
QRADAFVQNL REALRDVRLR GWTTALW