| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2993 |
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| Symbol | |
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| ID | 6244474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 3351893 |
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| End bp | 3354262 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642594796 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001859209 |
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| Protein GI | 186477739 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00312978 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACGACA TTCCGACCCT TCTGAACGCC GCGCTGACGC ATCATCAGGC AGGGCGCCTC
GCCGACGCGC AGGCGCTCTA CGACGCCATT CTGCAGACCG AGCCGGCGCA ATCCGACGCG
CTGCATTTCT CCGGCTTGCT CGCGTGCCAG ACGGATCGCG CGGACGCGGG CATCGCGTTG
ATGCGCGCAT CGATTGCGGC GAATCCGAAT GCCGTCTACT ACAACAATCT GGGCAACGTG
CTGCTCGGAC GTCGTCAGCT TGGCGAAGCG ATCGAAGGCT ATCGGCAGGC GGTGAATCTG
CGTCCCGATT ACGCCGAGGC GCACAACAAT CTCGGCAATG CACTGCGGGA AGCAGGCGAC
GCCAACGCCG CGATGATGAG TTGCGCCACG GCGATCGAAC TGCGGCCAGG TTACGCGGAG
GCGTACAACA ACCTCGGCAA TGCACTGAAG GATCTCGGCG ATCTCGGCAA CGCGGTGCTG
GCGTATCAGA AGGCCGTGTC GTTCCGTCCG GACTATGCGG ACGCGTTCGG CAATCTCGCA
CGCGCCGAGG CCGGGCGTGG CGACGCGGAC GCATCGATTG CCGCGTTTCG CCGCGCGCTC
GCGCTCGATC CGGATCGTGC CGACAGCTAC GACAGTCTCG CGAAGCTGCT GCACGCGCGC
GGTGAAATCG ACGCCGCGAT CGACACGTTG CAACAGGCGA CGCGACGCGA TCCCGCCGAT
GCCGCGCGTC ATCGCTTGCT CGCGCAATGG CTGCTTGGCC GCCAGCGCTG GGACGAAGCG
GCGCACGCGC TGACGAGCGC GGTCGAACTC GCGCCCAACG ACGCTGCGGG TTATGTGGAA
CTGGGCGACG CGTATCAGCA CGCAGACAAG CTCGACGCCG CGATCCTTTG CTATCGGACG
GCCACCGAAC TGGCACCCCG CGATGCGCCT GCGCACCATC GGCTCGCCGT TGCGCTCCTC
AAACAGCGCC GCGCAGACGA AGCGCTCGAG AGCGCGCAAA AGGCCGTTTC GCTCGAACCG
CATTCGGCCG TACCGCACGT GAATCTCGGC GACGTGCTGA GCGTGCTCGG CGACGCGGAC
GGCGCAATTG CGAGCTATCG GCGCGGCATC GCGCTCGACG GCGAAATGGA ACTCGCGCAC
AACCGCCTGC TGTTCGATCT CGCGACGCAC GCGCCGACGC CGCCCGCCGT CACGCTCGTC
GCCGCGCGTG AATTCGGCGC GCGCATGGCC GCGCGTGCGC GCCGCTGCGA GCATCCGGCG
CCGCAAGACG ACGGCAGAAA GCTGCGCATC GGTTTCGTGT CCGGCGATCT GCAACTGCAT
CCCGTGGGCA TTTTCATCGA ATCGGTGATG GAGCATTTCG CGGACGGGAG CTTCGATCTG
ATCGCCTACT CGACGCGCGC AAGCGAAGAC GACATCACCG CCCGCCTGAA ACAGCGCTTT
ACTGCGTGGC GCAGCCTCGT GAACGTGCGC GACGAACAGG CCGTGCAGAT GATTCGCGAC
GATGGCATCG ACATACTCGT CGATCTGTCG GGCCATACCG TGCACAACCG CCTGCCCGTG
TTCGCGTGGA AACCTGCGCC CGTGCAGGTC AGCTGGCTCG GCTATTTCGG CACGACGGGG
TTGAACGAAA TCGACTACGT GCTCGGCGAT CCACATGTGC TGCCCGTCGC TGAAGAATCG
CACTATGTGG AGAAGACCTG GCGTCTGCCC GACAGCTACC TGTGCTTCAC GCCGCCGAAC
GTCGATGTGG CCGTCGGCCC GTTGCCGATG ACGCTCAGCG GCCATGTCAC GTTCGGCTAT
TTCGGCAAGC TCGTGAAGAT CACGCCCAAC GTGATCGCCG CCTGGTCGCG TCTGTTGCGT
GCGGTGCCGG GCGCGAAGCT GATGATGAAA TCGCACGAAC TCGGCGCCGC GCACGCCCGG
CGTTCGGCGG CTGAACAATT CGCCGCGCAA GGCATCGACG CATTGCGCCT CATTCTCGAA
GGCGGCTCGC CGCGTCACGA ATATCTCAAA GCATATAACC GTGTCGACAT CATGCTGAGC
CCGTTTCCAT ATCCGGGCGG CACGACGACG GCGGAAGCGC TGTGGATGGG CACGCCCGTC
GTTGCGCTTC AAGGCGATCG CTTCGTCACG CATATCTGCG AGAGCGTGCT GAACGCGGCA
GGACTCGGCG AATGGATCGC ACGCGACGAA GACGAATACA TCGCACTCGC GAGCGCGTGG
GCCGCGCAGC GGGAGCGCCT CGCCGTCCTG CGCGCGCGTT TGCGTGCGCA GACGCTGGCG
TCGCCGCTGT GCGATGCACG GCGCTTCGCG ACCAATCTGA AAGCAGCATT CGAAGGCATG
TGGGCGCAAT ACGTTTCGCG CGCTGCTTGA
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| Protein sequence | MHDIPTLLNA ALTHHQAGRL ADAQALYDAI LQTEPAQSDA LHFSGLLACQ TDRADAGIAL
MRASIAANPN AVYYNNLGNV LLGRRQLGEA IEGYRQAVNL RPDYAEAHNN LGNALREAGD
ANAAMMSCAT AIELRPGYAE AYNNLGNALK DLGDLGNAVL AYQKAVSFRP DYADAFGNLA
RAEAGRGDAD ASIAAFRRAL ALDPDRADSY DSLAKLLHAR GEIDAAIDTL QQATRRDPAD
AARHRLLAQW LLGRQRWDEA AHALTSAVEL APNDAAGYVE LGDAYQHADK LDAAILCYRT
ATELAPRDAP AHHRLAVALL KQRRADEALE SAQKAVSLEP HSAVPHVNLG DVLSVLGDAD
GAIASYRRGI ALDGEMELAH NRLLFDLATH APTPPAVTLV AAREFGARMA ARARRCEHPA
PQDDGRKLRI GFVSGDLQLH PVGIFIESVM EHFADGSFDL IAYSTRASED DITARLKQRF
TAWRSLVNVR DEQAVQMIRD DGIDILVDLS GHTVHNRLPV FAWKPAPVQV SWLGYFGTTG
LNEIDYVLGD PHVLPVAEES HYVEKTWRLP DSYLCFTPPN VDVAVGPLPM TLSGHVTFGY
FGKLVKITPN VIAAWSRLLR AVPGAKLMMK SHELGAAHAR RSAAEQFAAQ GIDALRLILE
GGSPRHEYLK AYNRVDIMLS PFPYPGGTTT AEALWMGTPV VALQGDRFVT HICESVLNAA
GLGEWIARDE DEYIALASAW AAQRERLAVL RARLRAQTLA SPLCDARRFA TNLKAAFEGM
WAQYVSRAA
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