| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3067 |
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| Symbol | |
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| ID | 6198161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 3500646 |
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| End bp | 3503057 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641707015 |
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| Product | general secretion pathway protein D |
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| Protein accession | YP_001834118 |
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| Protein GI | 182679972 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0574712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCAAG TGAACGGACA TTTCCTGACG CGCTATCCGC GTCAGTCTCT GTCTTCCCTC
TTAGACGGAC CGGGCAGTGC TCGCCAAGGA ACTGGCGCAG CACAGGCGGT TCTTGCATGG
CTATCTCGGC GATCGACGCT GATGACCCTG TTGTTTGCTC TTTCGACGAT TCTTGCAGGC
TGTAATGGAA TTACTGGACC GGAAGTGGCT AGTCAGGTCA AACCGATGAA TGGCTTTGGC
GGGCAGGATC TGGCTGCGCG TTCCAGCACG AATGGAAACG ATACCTTTGG CGCTTCGCCG
CTCCCCGCGG CTCCGGGACC CATCATTTCT CGCGGAGGAA TCGCTGGCGC TGCCCAAGCC
AATGCGAGCG ATTTCGCGGA AAACGGCGCG AGCGCGGTTA CGGGTAATGT CACGCTGACG
CCTGTGGAGA GCGCGGGCGA TTATCAGTTG AATTTCGAAA ATGCCGAGGC CACAGCCGTC
ATCAAGACCG TGCTGGGCGA TGTCCTGCAG GTCAATTATG TCATCGATCC GCGCGTGAAT
GGGCAGATCA GCTTGACCTC ATCCCGGCCG GTTCCACGCA AATCCCTGAT TAGACTGTTG
GAATCGGCCT TGAGCGGGAT CAATGCCGTC ATCCTCAAGC AAAACGGCCT TTACCGGGTC
GTGCCGGCCG GCGACGCCAC CACGATTCAG AATGTCCACT ACCATGAAGC GGGCGAAGGC
TTTGGCGTGA CGGTCATCGG CATGAAGAAT GTCCCCGTCG CGCTGGCCGG ACGCGTTCTC
GAAGGATTGG GGAGCCGTGG CGGCTCGGTC CGGATGGAGG CCGATTCCAA TCTTCTGATC
TTTCAGGGAA CGGCCTCAGA GCGGCAGGCC GCGCTCGATG CGGCCTCCAT GGTCGATGTC
GATTGGCTCA AAACTCGATC CGTCGCCATT CTGCCTCTCA CCAATTCGGC GCCGGACACG
GTCATTGCCG AAGTCCATCG TATCCTTGGC ACTGGCGAAG GCGGTTTGAG CAAGGATATT
GTCCAGATGC AGCCGATCAA CCGGCTGAAC GCGGTGCTGG CCGTTTCGCG AAACCATGCC
GCCATCGATA AAGTGACACG GTGGGTTTCC AAGCTGGACA AGGCGGATTA CGCCGCCCTC
GGCGTCAACG TGTACAAGCT GCAATATGCC AATGCCAAAA ACGTCGCGGC CATGCTGAAC
CAGATCTATG GCGGCAGCGG CGGCCAAACC GGCCAGGATC AGGATAAGAA TGTGCTTCAG
CCGGGTGACT CATCCAGCTC AAGTATGCAG GCAGGCTTCA GCAAGAGCGG GAGTGGTTCC
AGCCAGGAAC CAAGCAGTCA ATCAAGCAAT CAAAGTGGAA GCGGCCGAGT CACAGCAGGA
TCCCTGTTCG CGAACGCAGG ATTGAGATCC AGCTCGGCCA ACTCGAATCC TTACGGAAGC
CTCAGCCCTG CAACAGCTGC GCAGACCTCT GGCACACGCA CTGATAATAC GAGTTCGCAA
GCGCCCGATG ACCGTCAAAG CAAGGTTATA CGCATTACGC CCGATATCTC GACTAATTCG
CTGCTGATCC ACGCTAATCG GCTCGATTAT CGATTGATAG AACGCACCAT TCACGCCATG
GACCGGCCAC CGGTCCAGGT CGAGATCGAA GTGACCGTCG CCGAAGTCAC CCTGACGGAT
GCGCTCAATT ACGGCGTACA AGCCTATCTC AACAGTTCCG CCGGCTCGTT GCAGATGCTT
GGAAGCGCCG GTATTTCCAA TGCCAGCATT CCCCTGGTCA CGCCCCATCC GGCGGTGAAC
CTGATGATCG GTCAGATCGC CAATCCGCGT GTGGTGATCA ATGCTTTGTC GAATATCACG
GATGTCAAGG TTCTCTCGAC ACCTTCGCTC GTCGTGCTCG ACCGGCAGCC CGCCGTGCTC
CAGGTCGGTA ATCAGGTGCC CATCCTCAGT CAGCAGGCGA CCTCGACACA AACGGCGAAC
CCGGCGATCG TCAACAGCGT CAATTACAAG GATACCGGCA TTATCCTGAA TGTGCTGCCG
CGTGTGAATG CCAATGGCGT GGTGGCGCTG GATATCGAGC AGCAAATCAG CGCGGTGACA
AACCCCGACC CGACGAATTT GACACCGACG ATTTCGCAAC GGCGGGTTCG CAGCACCATT
GCCATTCCCA ATGGTCAGAC GGTTCTGCTC GCCGGGCTGA TCCAGGAAAC AACCAATGGA
ACCCGGTCCG GCCTCCCCAT CATCAGCAAG ATCCGTTTCC TGAACGATCT CGTCACCAAT
CATAATTCAT CTGACAGCCG CACCGAATTG ATCATGTTCA TCAAGCCTCA GATCCTCCGC
AATGGTTTCG ACTCGCAGCA GGTTTCCGAG GAATTTCGTG AGCGCTTGCA GATGATGCGC
AGTCACCCGT GA
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| Protein sequence | MNQVNGHFLT RYPRQSLSSL LDGPGSARQG TGAAQAVLAW LSRRSTLMTL LFALSTILAG
CNGITGPEVA SQVKPMNGFG GQDLAARSST NGNDTFGASP LPAAPGPIIS RGGIAGAAQA
NASDFAENGA SAVTGNVTLT PVESAGDYQL NFENAEATAV IKTVLGDVLQ VNYVIDPRVN
GQISLTSSRP VPRKSLIRLL ESALSGINAV ILKQNGLYRV VPAGDATTIQ NVHYHEAGEG
FGVTVIGMKN VPVALAGRVL EGLGSRGGSV RMEADSNLLI FQGTASERQA ALDAASMVDV
DWLKTRSVAI LPLTNSAPDT VIAEVHRILG TGEGGLSKDI VQMQPINRLN AVLAVSRNHA
AIDKVTRWVS KLDKADYAAL GVNVYKLQYA NAKNVAAMLN QIYGGSGGQT GQDQDKNVLQ
PGDSSSSSMQ AGFSKSGSGS SQEPSSQSSN QSGSGRVTAG SLFANAGLRS SSANSNPYGS
LSPATAAQTS GTRTDNTSSQ APDDRQSKVI RITPDISTNS LLIHANRLDY RLIERTIHAM
DRPPVQVEIE VTVAEVTLTD ALNYGVQAYL NSSAGSLQML GSAGISNASI PLVTPHPAVN
LMIGQIANPR VVINALSNIT DVKVLSTPSL VVLDRQPAVL QVGNQVPILS QQATSTQTAN
PAIVNSVNYK DTGIILNVLP RVNANGVVAL DIEQQISAVT NPDPTNLTPT ISQRRVRSTI
AIPNGQTVLL AGLIQETTNG TRSGLPIISK IRFLNDLVTN HNSSDSRTEL IMFIKPQILR
NGFDSQQVSE EFRERLQMMR SHP
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