Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0007 |
Symbol | |
ID | 6201674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 5533 |
End bp | 6546 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641704003 |
Product | porphobilinogen deaminase |
Protein accession | YP_001831155 |
Protein GI | 182677009 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000143071 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.582224 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGGA ATAGCACGAT CGCTAACCCG CCGATAGATC AACCCCTTCC CCGTCTGCGG CTCGGCACGC GCGGCAGCCC GCTGGCGCTT GCCCAGGCGC ATGAGCTGGC AGATCGTCTT GCCCGCGCGC ATGGCTTTGC GAAAGAAGCA GTTGCCATCA CGATCATCCG CACGAGCGGC GACATGATTC AGGACCGGCC CCTTTCCTTG GCGGGAGGCA AGGGCCTGTT CACCAAGGAA CTCGATCAGG CCTTGATCGA AGGCATGGTC GATCTCGCCG TCCATTCCGC CAAGGACCTG CCGACCATCC TGCCGGAAGA CCTCATCATC GCCGGCTATT TGCCGCGCGA GGACGTGCGC GATGTCTGGA TCTCCCCAAA GGCCGGCCAT CCGCGCGATT TGCCGCCGGG CTCTGTCGTC GGTACGGCCT CGCTGCGGCG CGGTGCACTT TTGAAACGGC TGCGCCCCGA TCTCGAAGTC AGATTATTGC GCGGCAATGT CGAGACGCGG CTCGCCAAAC TGGCCGCCGG GGAGGTCGAT GCGACTTTAC TGGCACTGGC TGGCCTCCGT CGCCTCGGCC TTGCCGACAA GGCGACACAA GTGCTGGCGA TCGAGGATTT TCTGCCCGCC GCCGGGCAGG GCGCGATCGG CATTACGACA CGGCGGGATG ATGCGGCCAC CCTGGCGCTT CTCGCGCCGA TTCTCGATCC GGCGACTCAT GTGGCGCTCG CCGCCGAGCG CGGCTTCCTC ACCGTGCTCG ATGGGTCCTG CAAAACGCCG ATCGGTGCTC ATGCCACGGT CGAACACGAT CAAGTCACTT TGCGCGGCAT CGTCTTGCGG CCGGATGGAT CGGAATGGTT CGAGGCCTGT GAAAGCGGTC CCCTTGAAAG CGGTTCCCTG GAGGCGGCGC GGGAATTAGG CGAAACCGCA GCGCGCGCTA TTCTGGCGCG GTTGCCGGAA GGATTCTTCC AAGAGAGCGC CCAAGAAAAT GCCCAAAAAA ACGCTAAGGA GTAG
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Protein sequence | MSRNSTIANP PIDQPLPRLR LGTRGSPLAL AQAHELADRL ARAHGFAKEA VAITIIRTSG DMIQDRPLSL AGGKGLFTKE LDQALIEGMV DLAVHSAKDL PTILPEDLII AGYLPREDVR DVWISPKAGH PRDLPPGSVV GTASLRRGAL LKRLRPDLEV RLLRGNVETR LAKLAAGEVD ATLLALAGLR RLGLADKATQ VLAIEDFLPA AGQGAIGITT RRDDAATLAL LAPILDPATH VALAAERGFL TVLDGSCKTP IGAHATVEHD QVTLRGIVLR PDGSEWFEAC ESGPLESGSL EAARELGETA ARAILARLPE GFFQESAQEN AQKNAKE
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