| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1277 |
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| Symbol | |
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| ID | 6202082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 1404470 |
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| End bp | 1406851 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641702799 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001829973 |
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| Protein GI | 182681813 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0868326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCAT TTGTATCTCT CACAGTAGCA AGCGTAACCG CACTCTTTGT TGCCTCCCCT
GCGTTCGGTC AGGAGGCCAC GCAATCTACA ACGCTGGATA CGATGATCGT TACCGGCACG
CACGTGACCG AGCGTACTGT GGTGGAATCC CAATCGCCGA TTGACATTAT CAGCGCTGCA
CACTTGGCCG CTACGGGTAG TTCAGAACTG GCTACGGCGC TGTCCCGAAT GTTGCCATCA
TTAAATTTTC CGCGTCCGGC ACTGGCAGAT GGCACCTCCG GTATTCGTCC GGCACAGATG
CGTGGACTAG CGCCGGATCA AACATTGGTG CTGATCAATG GCAAGCGCCG CCACCTCTCG
GCGCAAATCA ATGTCAATGG CACGATTGGG CGCGGCAGTT CAGCCGTTGA TCTGAACACG
ATTCCCATCA CCGCGATTGA GCGTATAGAA GTGCTGCGTG ATGGGGCCTC GGCACAATAT
GGCTCAGATG CAATCGCTGG GGTCATCAAT ATTGTGCTGA AAGGTGCCAC TCAGGATGGC
AGTTTGGCAG TGGAACACGG CCAGTACAGC GCCGGCGATG GTGCCACATC CAAGTTATCC
GGCGATTCCG GAATCTCTTT CGCTAACGGA CGCGGCACGC TGCACCTGGC AATGGACATC
AGTCAACAAG AGCAGACTAA TCGTGCTGGT CCCTATCAAG GGAGCGCGCC CAATACCGGC
AACTATCCCG ACATTGGACG TACTGCATTT ATCTACGGTG ATCCACGGGT CAATGCGGTT
GCGTTCTCAG CTAATGGCAT GTTCGATGTT GGGGAGCATG TGAAGGGTTA CGCCAACGCC
ATGCTCAGCA ACCGCGACAT TACGTCGTTT GCGTTCTATC GCTCACGCAA TCACAACGGG
CAAAGCATGT TGCTGGCGCA GCGATATCCA GAGGGTTACG TGCCTGAAAT CGAGCAGAAC
AGCAAAGACC GTTCACTGGT TACCGGACTC AAGGGCAGCA CCGAGCACGG CTTGAACTGG
GATATGAGCT ACAACTATGG AAGCAATCAT ATCGGCTTCC ACACCAACAA CAGCATTAAC
TACAGTCTGG GTGTGGAAAG TCCAAGGGAT TTCTACGATG GTGCGTTGGA GTACACGCAA
CACTTGCTCA ACACCGATTT TACTAAGGTG CTGGATTGGG GACTGACTTA TCCAGTCACA
CTCTCCTTCG GCACCGAATA CCGCTATGAA CAGTGGAATC AGTCCCCTGG CATTCCGGCT
TCATATAACG GCATGACCGG CGGCGCACAG GGATTTGCAG GGTTTTCACC TCTGAATACC
GTGCATGCGA ACCGTAATAA TTACGCTCTG TATGCTGGAC TGGATGGCGA TCTTAGCGAG
CACCTATCTG CAGGAGTGGC CGGGCGGTTC GAGCACTACT CTGATTTTGG CAATCAGACA
TCAGGCAAGC TCTCGGCACG CTATGCATTG ACTGATCAGG CGGCGCTACG CGCCACCATC
GGCAATGGCT TTCGTGCGCC GTCACTGGCA CAGCAACGCT ACCAAGTGGT CACCAGTACC
TACAGTAACG GTACTTTCTA CGAGTCAGGG ACGTTCCCGA CAACGAGTCC CGTTGCGCAA
GCACTGGGTG CAGCGCCGCT GCGGGCTGAA TCATCGTTGT CCTATAGCCT GGGTTTGGTA
CTACAACCGT TCGAACGGCT TTATTTGACG CTGGATACCT ACCAAATCGA CATCGCGCAC
CGGATCTTGC TGTCTTCCAA TCTTAACGAT GCAGCGGTCC TTGCTGCACT ACAGCAACAA
GGCAATAGCA ACGTTACCAG CGTTCGCTAT TTCGCAAACG CGGCCAATAC CCGCACCCGT
GGTGTCGACT TGGTCGGTAC GTATACGATT CCGTTCGCTG TAGGTCAGCT TGATCTGACT
ACAAGCTACA GTGGCATCGC CACCAGGATT CGCAGTGCAG TCACACAGCC AGCAGCACTC
TCGGCCATCG GTTCAACGCA GACGATTGTA GGACGGGACG AAATCGGTCG GCTGGAAGAG
AGTTTCCCGA AAGACAAGCT GATCCTCAGC GGTACATGGA AGCTGACACA GTGGGATCTG
ATGCTCGCAG CAACACGCTA CGGCACGGTA ACGGTGCGTA ATCCAACGTC CGTCTCACGC
GATCAGACGT ACGGCGCTCG CTGGGTAGTC GATGCGTCGG CCAGCTACAA GCCAGACATG
CACTGGATGT TGACGTTGGG TGCAAACAAT CTGTTGAATG CTTATCCAGA TAAAACAGTC
AACGCAATCA ACTCGATCTA CGGACAGATG CCTTACAGCA ACTATGCGCC CTTCGGCTTT
AACGGGGCCT ACGTGTATGC ACGTATTGGT TACAGTTGGT AA
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| Protein sequence | MNPFVSLTVA SVTALFVASP AFGQEATQST TLDTMIVTGT HVTERTVVES QSPIDIISAA
HLAATGSSEL ATALSRMLPS LNFPRPALAD GTSGIRPAQM RGLAPDQTLV LINGKRRHLS
AQINVNGTIG RGSSAVDLNT IPITAIERIE VLRDGASAQY GSDAIAGVIN IVLKGATQDG
SLAVEHGQYS AGDGATSKLS GDSGISFANG RGTLHLAMDI SQQEQTNRAG PYQGSAPNTG
NYPDIGRTAF IYGDPRVNAV AFSANGMFDV GEHVKGYANA MLSNRDITSF AFYRSRNHNG
QSMLLAQRYP EGYVPEIEQN SKDRSLVTGL KGSTEHGLNW DMSYNYGSNH IGFHTNNSIN
YSLGVESPRD FYDGALEYTQ HLLNTDFTKV LDWGLTYPVT LSFGTEYRYE QWNQSPGIPA
SYNGMTGGAQ GFAGFSPLNT VHANRNNYAL YAGLDGDLSE HLSAGVAGRF EHYSDFGNQT
SGKLSARYAL TDQAALRATI GNGFRAPSLA QQRYQVVTST YSNGTFYESG TFPTTSPVAQ
ALGAAPLRAE SSLSYSLGLV LQPFERLYLT LDTYQIDIAH RILLSSNLND AAVLAALQQQ
GNSNVTSVRY FANAANTRTR GVDLVGTYTI PFAVGQLDLT TSYSGIATRI RSAVTQPAAL
SAIGSTQTIV GRDEIGRLEE SFPKDKLILS GTWKLTQWDL MLAATRYGTV TVRNPTSVSR
DQTYGARWVV DASASYKPDM HWMLTLGANN LLNAYPDKTV NAINSIYGQM PYSNYAPFGF
NGAYVYARIG YSW
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