Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3828 |
Symbol | |
ID | 6205452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4972462 |
End bp | 4974915 |
Gene Length | 2454 bp |
Protein Length | 817 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641693495 |
Product | glycoside hydrolase family 13 protein |
Protein accession | YP_001820702 |
Protein GI | 182415636 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.535052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTCAC CCGGCTACAG GATCATCCGC GCCTGGCTCG AGTCGCTCAC CTCCGGGGTG GTCGAGTTGG ACCGCGACTG GCTGGGCGCG CGGCCGCCGC AGTTCTCGAT GGGCCAACAG TGCCCGGTGC TCGGCGGTCT GGCGCCCGCC TCGCGGCGGA TCACGGGCAG CGCCTTCGGG TATCGGGTGG AGGGCAACGA CATCGTCTTC GTGCTGCCCG AACTGCAGTG CGCGGGCGTC GACGTGGAGC GCGACGGCGT CTATCTGGGC GGCGATTTCA ACGGCTGGCA GCAGGCGGTC GGCTTGGCCG AGTGGCGGAT GCAGCGCAGC GAACTCGAGG GAGAGTCCGT GCTCTCGTGG TCCGGACCGG CGGCGCGTTT TTTCGATCCG GCCGGACAGC GATTCAAGTT CGTCACGGGC GAGCACCAAT GGCTGAGCGT GCCCGATGAC GCGGCGAACG CCGTCCGCGA CGCGGACGGG AACATCAATC GCGCCATCGA TCCGGCACGC ACGGGCCGGC ACTTGTGGAG CTTCGTCTGT CCAGCGCCGC TGGATCTGGC CGAATCGCTG GTGATTGGCT GGGCGGCGGA GCTGACGCCG CCGGCGACGC CGCTGGTGCC GGGGCGGTTT TTCTACCAGC TCAAAACGGA CCTGCCGCTG GGCGCGCTGG TGCGCGAGGG CGAAACGGTG TTCCGGCTGT TTGCGCCGCG AGCACGCTCG GTGACGTTGT TCATCAGCCC GAACCGCGCC GGGTTGAAGA GCCCACAGCA AGTGCCGCTG GCGCGGCGGC CGGATGCGGA CGGACGCGCC GGCGTTTGGG AGGTCGCGCT GAACCAGCGG CTGCACGGCT GGTTTTACTG GTATGTGATC GACGGCGTGC GCGAGGGCCG GGGGGCGTTC GATCCGACGC AGCGCGTGCT CGATCCGTAT GCGCTGGCGG CGCTCGGGCG CGAGGGGCCT GGCATCGTGC TCGATCGCGC GTGGGTGGGG CAGGGCGACC GCGGTTTCCG CACGCCCGCG TGGCAGGATC TCGTCATCGC CGAAGCGCAC GTACGGGATC TCGCGACCCA TGCGCCGGTG CCGATGACGC CGGCAGAGCG GCGAGGGTTC AGCGGGCTGC GGCGCTGGGT CGAGCACCCG GAATTTTATC TGCACCGGCT CGGCGTGAAC TGCGTGGAGC TCCAGCCGGT CCACGAGTTC GATAACCACC CGCACGACCA CTATCACTGG GGTTACATGA CCAACAGCTT CTTCTCACCG GAGAGCAGCT ACGCGCTCGA TCCGGCGGAA GGCTCGGCGG TGCGCGAACT CCAGGATCTG GTCCGCGCGT TCCATGGCCG CGGCATGGCG GTGTTGCTGG ACGTCGTCTA CAATCACGTG GGCGTGCCGC CGCACCTGAT GTTCATCGAC CGGCTCTATT ATTTCGAACA GCATGCGGAC GGCCGGCTCG TCGATTGGAG CGGCTGCGGC AACGACCTGC GGGCAAACTC GGCGATGGCG CGGCGGCTGA TCATCGACAG CTGCGTCCAC ATGATCGAAG CGTACGGCGT CGACGGTTTC CGCTTCGATC TGGCGGAGCT GCTCGGCGTG GAGGTGTTGC GCGAAATCGA GGCGGCGCTC AAGCGCGTGA AACCCGACGT GGTGCTCATC GCGGAGCCGT GGAGTTTTCG CGCCCACATC GCGAGCCGGT TGCGCGACAC GGGCTGGGCC TCGTGGAACG ACGGCTTCCG CGATTTCCTG CGCAAATACG TGCGGGGCGA GGGCGATGCC CGCCGGATGG AGTATTTCCT TAAAGGCTCG CCCTGGTATT TCGCGAAATG GCCGGCGCAG ACGGTGAACT ACACCGAGTC GCACGACGAC CGCACGTGGA TCGACATGAT CACGGAGCAT CACGGCTACG ACGGCTTTGC GCCGACCCGC CGCGACGTGC AGCGCACCCA CTTGATGGCG GCGCTGTTGT TCATGTCGGT GGGGATTCCG ATGCTCGCGG CCGGACAGGA TTTCCTCCGT TCGAAGCGTG GCGTGAGCAA CACCTACCTG CGCGGCGATC TCAACGCGCT CGATTACCGG CGGCTGTTCC GCTATCCCGG AACGCACAGC TATTTCGCGG AGTGGATCGC GTTTCGCCGG AGCTGGCTGG GCCGGCTGGT GCGGCACTAC GAGCGCGTGA GCGACGCGTT CTTTCAATTC TTCCATCTCG ACGGCGCCCC GGCGTTCGCC GTCGTCTACA ACGCGGATCG CTCGCTCGGC CCGGAACGCC TGCTGTTCGC CGTCAACCCG ACGCAAGCGG ATCTCATCGT GCCGCTGGAC GAAGCGACCG CTGGCGCCGG CTGGCGCCAG CTGGCCAACC GCGAGCGGTT CATCAATCCG CAGACGCCGG GCGCGACGCA ACCGGTCGAG CCCGCATTGT TCGTGAGTGC GCTTGGCTGT GGGCTTTGGG TAAGTGACAG TTGA
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Protein sequence | MASPGYRIIR AWLESLTSGV VELDRDWLGA RPPQFSMGQQ CPVLGGLAPA SRRITGSAFG YRVEGNDIVF VLPELQCAGV DVERDGVYLG GDFNGWQQAV GLAEWRMQRS ELEGESVLSW SGPAARFFDP AGQRFKFVTG EHQWLSVPDD AANAVRDADG NINRAIDPAR TGRHLWSFVC PAPLDLAESL VIGWAAELTP PATPLVPGRF FYQLKTDLPL GALVREGETV FRLFAPRARS VTLFISPNRA GLKSPQQVPL ARRPDADGRA GVWEVALNQR LHGWFYWYVI DGVREGRGAF DPTQRVLDPY ALAALGREGP GIVLDRAWVG QGDRGFRTPA WQDLVIAEAH VRDLATHAPV PMTPAERRGF SGLRRWVEHP EFYLHRLGVN CVELQPVHEF DNHPHDHYHW GYMTNSFFSP ESSYALDPAE GSAVRELQDL VRAFHGRGMA VLLDVVYNHV GVPPHLMFID RLYYFEQHAD GRLVDWSGCG NDLRANSAMA RRLIIDSCVH MIEAYGVDGF RFDLAELLGV EVLREIEAAL KRVKPDVVLI AEPWSFRAHI ASRLRDTGWA SWNDGFRDFL RKYVRGEGDA RRMEYFLKGS PWYFAKWPAQ TVNYTESHDD RTWIDMITEH HGYDGFAPTR RDVQRTHLMA ALLFMSVGIP MLAAGQDFLR SKRGVSNTYL RGDLNALDYR RLFRYPGTHS YFAEWIAFRR SWLGRLVRHY ERVSDAFFQF FHLDGAPAFA VVYNADRSLG PERLLFAVNP TQADLIVPLD EATAGAGWRQ LANRERFINP QTPGATQPVE PALFVSALGC GLWVSDS
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