Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3109 |
Symbol | |
ID | 6204340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 4044617 |
End bp | 4045663 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641692774 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001819989 |
Protein GI | 182414923 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3507] Beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.158232 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATCA CGCTCCCCGC CGCCATGTCC GTGGCGGCTG AGGCGGGCGA ACCGGCGCTC ACCACGCCCG GCAAACCGTA CAGCACGAAG TCCGTCTGGG AGTATTCGAA TGTTGGTGAG CCACCGATTC CTCCCGTCGA GCCTTTGATC GAAGTGGGAT TGCGGGACAC CGCCGTGACT CGCGGCGCGG ACGGCAACTA TTACATGACC GGTACGATCG GTCCGGATTT CATGACGGCG AACGAGGGGA TTCCGCTCTG GCGTTCGCCC GACCTGAAAA ACTGGGAGTA TCTCGGGCTC GTGTGGACTT TTGAACGGGA TGGCACCTGG CAGAAGGAAT GGACCGTGAA GAATGGCGTG CGCCGCCGCG CCGTCTGGGC GCCGGAGATT CACCACCTGC GCGGCACGTT CTTCATCACC TACAGCATCA CCGGACTTGG CACCGGCATT CTGCGCAGCA CCACCGGCCG CCCGGAAGGG CCCTACGTGA GCGCCCATAC GCCGGATGCG CCGCTCACCT CGGGCATCGA TGCTTCGCTT TTCGTCGAGG ACGATGGCGC CGTCTATTTC GTTTTCGGCA GCGGATACCT GGCTCGGCTC AAGGATGACT TGAGCGCGCT CGCCGAGGAT CCTGTCCGCC TGCGCTGCAC GCCGGCCGAC ACCGACATCG AGCATCACCA TCCTGCGCGT CCCTGCCGAA TGGATCAGTT CGACCATGTC GGCTACGAGG GCGTGTTCCT TTTCAAACGG AACGGACGCT ACTACCTCTC CGGCGCCGAG CGGTACTACG AGCGCTACCA TTGCATGACG GCGGAGTCGA CGACCTTGCG CGGGCCGTAT TCCGCTCGCT ACGTGTCGGT GCCGCACGCC GGTCACAACA CGTTCTTTCA GGACCACGAA GGACGCTGGT GGAGCACGAT GTTCGGCAAC GACCCGCAAG CGCCGATTCA AAAACGTCCG GGCATTCTTC CTGTGAAATT CGACGCCAAC GGTCATATCG TGCCCGTGGT CGCCGGGCAG CCATGGACGC CACGAAAGCG AAGCTGA
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Protein sequence | MLITLPAAMS VAAEAGEPAL TTPGKPYSTK SVWEYSNVGE PPIPPVEPLI EVGLRDTAVT RGADGNYYMT GTIGPDFMTA NEGIPLWRSP DLKNWEYLGL VWTFERDGTW QKEWTVKNGV RRRAVWAPEI HHLRGTFFIT YSITGLGTGI LRSTTGRPEG PYVSAHTPDA PLTSGIDASL FVEDDGAVYF VFGSGYLARL KDDLSALAED PVRLRCTPAD TDIEHHHPAR PCRMDQFDHV GYEGVFLFKR NGRYYLSGAE RYYERYHCMT AESTTLRGPY SARYVSVPHA GHNTFFQDHE GRWWSTMFGN DPQAPIQKRP GILPVKFDAN GHIVPVVAGQ PWTPRKRS
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