| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1898 |
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| Symbol | |
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| ID | 6206157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2381302 |
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| End bp | 2383728 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641691546 |
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| Product | permease |
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| Protein accession | YP_001818781 |
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| Protein GI | 182413715 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCG TCTTTCGCTC CCTCCTGAAG TCCCCCGGCT TCACGACGAT CGCGCTGCTC
ACGCTCGCCC TGGGCATCGG CGTGAACACC GCCATGTTCG GCTTGGTCAA CACGCTTCTG
TTCAAGGCCG CGCCTTACCC CGACGCCGAA CGTCTCGTTC GCATCTTTCG CACCTCGCCG
CAATCGCAGA CCTGGCCGCA CTCCGCCGCC GAGCTCGTCG ATTTGCGCGC GCAGGCCGGC
TCGCTCGAAC GCTTCACGTA TTTCCGCTGG CACACGTTCA GTTTTGCCGA ACCCGGCCAG
CCCGCGGAAC GCATCGCCGG GCTCGCCGTG GCGGCGGACT TCTTCAAAAC CCTCGGTGTT
CAGCCCGCGC TCGGTCGCAG TTTCAGTGCC GAGGAACTCA CGCCCGGCAA GGATCAGGTC
ATCGTGCTCA GCCATGGTCT GTGGCAGCGC CGCTTCGGCG GCGATCCCAC CATCGTGGGT
CGCACGCTTC GGATCGACGG CCAGGACGTC ACGGTCATCG GCGTCATGCC CGCCGGCGTC
GAATACCCGA TGCTCTGGGG CCGCATCGAC GCGTGGCGGC CGCTCGCGCT CACGACCGAG
CAACTCCAGA ACCGCGGCAA TCATTACCTC AACGCGCTCG GCCGTCTCCG GACCACCACA
TCGCTCCGCC AGGCGCAGGC CGAGTTCGAC ACGATCGCCG CACGTTGGGC GAAGGATTTC
CCGGATGTCA GCTCCGGCGC GGGACTGCGG CTGGTGGTGC TGCACGAGTC CACGATGGAC
CAAGTCGGCC GCAGCCTGTC GCTGACGGTG ATGGGCCTCG CCGGGTTCGT GCTGCTCATC
GCCTGCGCCA ACCTGGCCAA TCTCCAACTC GCGCGTACGG CCAGTCGCGC GCGCGAGTAT
GCGATCCGCG CTGCGCTCGG CGCCTCGCGC CGGCGGCTGA TCGGCGAATT GCTGCTCGAG
AGCGTCGTGC TCTCGCTCGC CGGCGGCGCC CTCGGTTTCG TCCTCGCCCA ATGGGTCAAC
GATTTCCTCG GCCGTCAGAT CCGGATCGGC GATGAACTCG GGCTCGCCAT CTCGCTCGAC
CTGCCGGTTT TCGTGTTCGC TTTGCTCGTC TCTCTCGCGG CCGGCCTGCT CTTCGGCGTG
CTACCCGCGT GGACCGCCTC GCGAGCCGAC GTAAACGCCA CGCTCAAGCA GCAAGGTCGC
GGCTCCACCG GCGATCGCTC GCAACACCGG CTGCGCCACG GCCTGATCGT CGCCGAGGTC
GCGCTCGCGC TGTCGCTGCT CGCCGCCGCC GGCTTCTTCG TGCGCGGAGT CCAGCGCTTC
AGCGGACTGG ATATGGGCTG GAACCGCGCC GGCGTCCTCA CCGCCACGCT CAACCTGCCC
GATTCGAACT ACGGCAAGGA TGACCAGAAG CGCGCGTTCT ACCCGCAGGC GCTCGAGCGG
CTCGCCGCCT TGCCGGGCGT CGAACATGCC GCCCTGTCCT CGTCCCTGCC GATCTGGGGC
TACAACAGCT CACGCGACGT CGTCCCCGAG GGCCGGCCGC TGCCACCGCC CAGCGCGGTT
CCGCTGGCCT ACTACGTCGC CGTCACCGCG GATTTCTTCC GCGTGCTCGA GGTTCCGCTC
GTGCAGGGTC ATGATTTCTC CACCAACGTC CGCGCCGACA ACCCACGCGT GGCCATCGTC
AACGAGACGC TCGCACGCCA GTTCTGGCCG GGCGAAAATC CGATCGGCAA ACGCATCGGC
AGCTCCGACC CCGACAACAA GGAGTGGTGG GAAGTCATCG GCGTCGTACG CGACGTCGGT
TTCGCCGGCA GCCTGTCGGC GCCCGACACG CGGCTGCAGG TCTACGTGCC GCTCGTGCAG
GAGCCGTGGA ACTATCTCTC CATCGCGCTG AAATTCTCCG ACAGCGCCGC CGCCACCGCC
ACCTCCACGG CGATGGCCAA CAGTCTCCGC CAGGCCATCG CGGGGATTGA TCCCGATTTG
CCTGCCTACA ACATCCGCAC CATCGAACAG GCCATCGAGC GCATCGCCCG CAATATCCTG
CTCGCGAACC AACTCCTGGT GGGCTTCGCG TTGCTCGGCC TGCTGCTCGC CGCGATCGGC
CTCTACGGCG TGATCTCCAA CCTAGTCGTG CAACGCACGC CGGAATTCGG CATTCGGATC
GCGCTCGGCG CGCAGGCCCG CGACGTTCTC TGGCTCGTTC TCGGCAAGGG CGCGCAGCTC
GCCGCGCTCG GCACCGCGCT CGGCCTGCTC GGCAGCTTCG TCCTGCTGCG CCTCTTCGCC
GCGGTGATTC CGGCTCTGCC CGGCCAGGAC TATCTCCTGC TCGCCGGCAC CGTCGTCCTG
CTGCTCGCCG TCGCCTTGTT CGCGTGCTGG ATCCCCGCGC GCCGCGCCAC CCGTGTGAAC
CCGCTCGAGG CCCTTCGCGC CGAATAG
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| Protein sequence | MKFVFRSLLK SPGFTTIALL TLALGIGVNT AMFGLVNTLL FKAAPYPDAE RLVRIFRTSP
QSQTWPHSAA ELVDLRAQAG SLERFTYFRW HTFSFAEPGQ PAERIAGLAV AADFFKTLGV
QPALGRSFSA EELTPGKDQV IVLSHGLWQR RFGGDPTIVG RTLRIDGQDV TVIGVMPAGV
EYPMLWGRID AWRPLALTTE QLQNRGNHYL NALGRLRTTT SLRQAQAEFD TIAARWAKDF
PDVSSGAGLR LVVLHESTMD QVGRSLSLTV MGLAGFVLLI ACANLANLQL ARTASRAREY
AIRAALGASR RRLIGELLLE SVVLSLAGGA LGFVLAQWVN DFLGRQIRIG DELGLAISLD
LPVFVFALLV SLAAGLLFGV LPAWTASRAD VNATLKQQGR GSTGDRSQHR LRHGLIVAEV
ALALSLLAAA GFFVRGVQRF SGLDMGWNRA GVLTATLNLP DSNYGKDDQK RAFYPQALER
LAALPGVEHA ALSSSLPIWG YNSSRDVVPE GRPLPPPSAV PLAYYVAVTA DFFRVLEVPL
VQGHDFSTNV RADNPRVAIV NETLARQFWP GENPIGKRIG SSDPDNKEWW EVIGVVRDVG
FAGSLSAPDT RLQVYVPLVQ EPWNYLSIAL KFSDSAAATA TSTAMANSLR QAIAGIDPDL
PAYNIRTIEQ AIERIARNIL LANQLLVGFA LLGLLLAAIG LYGVISNLVV QRTPEFGIRI
ALGAQARDVL WLVLGKGAQL AALGTALGLL GSFVLLRLFA AVIPALPGQD YLLLAGTVVL
LLAVALFACW IPARRATRVN PLEALRAE
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