| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0594 |
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| Symbol | |
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| ID | 6208572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 710753 |
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| End bp | 712558 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641690216 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_001817484 |
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| Protein GI | 182412418 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG CGTTGGAACA AACCGCCGCG CCCGCGCCGC GTGGCGGCTG GCTGCGTTGG
TGGCCGGTGA TGGCGGCCGC GGTCCTGATC GGTCTCGGCG CCTGGGGCAC CGCGCATTGG
CTCGAGTACC GTGCGCTCGC CCGGATCCAG CAATCGCTCC CGCCGCTGCC TGCGCTCGGC
CAACGGCCCG CCGTGCTGGG CGAACGTCTC GCCCAGGCGC GGGCGGCCGC GCTCGCCGGC
GATCGCGTCA TTGAGCATGC GGCCGAACTC GGCCGGCTGT TTCACGCCAA CGGATTCCAC
CGCGAGGCGC AGGTCTGTTG GGAAGCGCTT CGCTCGGCTC AGCCGCGGGT CGCGCGCTGG
AGCTACTACC TCGCCGACCT GCGCCGCACC GCCGGCGATC AGGCAGGTTA TGTCGCGCTG
CTCGAGGAAA CCGTCGCCCG CGCGCCGGAC TACAGCCCCG CCTGGCTGCA GCTCGCGGGC
GTGCGGTTCA AGTCTGGCGA GATCGATGCA GCCGCCAGCG CCTATCAGCG CCGGCTCGCG
TTGCTCCCGG GCGACTCCTA TGCGCGGCTG GGACTCGCCC GCGTGGCGCT GCATCACCAG
CGCACCGCGG AAGCGCGCGA CCTGATCGAG CAGATCGTGC GCGAAGATCC AAAGTTTCCC
ACGAGTCACA ATCTTTATGC CGAGATGCTG GCGGCCGACG GCAACCGCGA CGGTGCGCGA
CAGCAGCGCT GGCTCGCGCG GCAGGCCGGA CGTTTTCGAG AGGCCGACGA TCCCTGGCTG
ACGGAGCTCA ACGCGTGGTG CTTCGATCCC GACCGGCTGT TCATGCTCGG CACGATCGAT
TTTCAAACGG AGCGTCATCA GGAAGCGCGC GCGTTCTATG AGAAGGCCGT GCAGCTCGCG
CCGGAGGATG CCGAAGCGCA CGCGCTGCTG GGTGATCTCT ATCTAAAACA GGGCGATCCG
GCGCGGGCGC GAGACGCGCT CGAACACAGC CTGCGGATGC CGCGCCCCGG AAAACCGCCG
GCGATGCTGT TCGTAAATCT CAGCCAGGCT TACCGCGAGT TGCACGACTC GGCCCAGGCG
CTGGCGATCG TGGAGCGCGG CTTGCGCGAA GCGAGTGTGT CGTTCGATCT GCACAATGCG
CACGGCATCG CGCTCGCCGA TCTCGGACGG CACGAGGAGG CGATCGCCGC TTATCGACGC
GGACTCGCAA CGCAACGCGG CAACGCAGAG ATCAATTTCA ATCTCGCGAT CTCGCTGCTG
GTGCTCGGCC GTGGCGACGA GGCGCACGCT CACCTCAAGC AGTCATTGAC ACTGCAGCCC
ACGTTTCCCA AGGCGCTCGC GCTGCTCGGC CGGATGGAAA TGAGCGCCGG GCTTTGGCGC
GAGGCGGAGC AGTATCTCCG GCCGCTCTAT GAAGCTTTTC CGGAAGCGCC CGACTCGCAC
CAGCTCCTCG CGGAATGGGA GCTGCGTGCC GGCTCCGCCG CGAGCGAGCA AAATGACGCG
GCCGCGGCCG AAGGGCATTT TCGCGCGGGG CTCGCGCTCG CGCCCGAGCA GCCGGATCTG
AATCTGCAGC TCGGCGTGCT GCTGGTGACG CTGGGGCGCG CAGCGGACGC GGTGCCTCCT
TTCGAGACCT ATCGCCGCGT GCGGCCCGAG GATCCGAGTG GTGCGTTGTT CCTCGGCCAG
ACGTATGCGC AGCTGGGCCG AATTCCGGAC GCACGTCGCG TGCTGGCAGA AGGCGAACAA
CTCGCCACGC GCGCGGGCAA CGCCACGACG GCGCAACACT GCCGCGAAAT TCTGAGCCAG
CTGTAG
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| Protein sequence | MSAALEQTAA PAPRGGWLRW WPVMAAAVLI GLGAWGTAHW LEYRALARIQ QSLPPLPALG
QRPAVLGERL AQARAAALAG DRVIEHAAEL GRLFHANGFH REAQVCWEAL RSAQPRVARW
SYYLADLRRT AGDQAGYVAL LEETVARAPD YSPAWLQLAG VRFKSGEIDA AASAYQRRLA
LLPGDSYARL GLARVALHHQ RTAEARDLIE QIVREDPKFP TSHNLYAEML AADGNRDGAR
QQRWLARQAG RFREADDPWL TELNAWCFDP DRLFMLGTID FQTERHQEAR AFYEKAVQLA
PEDAEAHALL GDLYLKQGDP ARARDALEHS LRMPRPGKPP AMLFVNLSQA YRELHDSAQA
LAIVERGLRE ASVSFDLHNA HGIALADLGR HEEAIAAYRR GLATQRGNAE INFNLAISLL
VLGRGDEAHA HLKQSLTLQP TFPKALALLG RMEMSAGLWR EAEQYLRPLY EAFPEAPDSH
QLLAEWELRA GSAASEQNDA AAAEGHFRAG LALAPEQPDL NLQLGVLLVT LGRAADAVPP
FETYRRVRPE DPSGALFLGQ TYAQLGRIPD ARRVLAEGEQ LATRAGNATT AQHCREILSQ
L
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