| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0060 |
|---|
| Symbol | |
|---|
| ID | 6208354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 70435 |
|---|
| End bp | 72723 |
|---|
| Gene Length | 2289 bp |
|---|
| Protein Length | 762 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641689681 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001816951 |
|---|
| Protein GI | 182411885 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.691294 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCCC CAGCCAGCCG GCTCGTCCCC TTCGGCACGA TCCTGGCGTT CGCGTTGCTT
CCCGCCGCCC GTGCTGCAGA CGCGCCTTGG CGACCGTTCT CGCCCGACAG TCCGTGGAAT
CAGCCGATCG CGCCCGACGC GCCGGCGGAT CGCGATTCCG CGCGCTTGGT CGACGAACTC
GCCTCGCGCG GTCCGCTGCT CATCAACATC AAGGACTGGT CGATCCCGGT CTACTTCGTC
GACGCCGATT CCACCCCGAA GCACGACGTG GGTGATCTGC GACCCGGCGT CTACGGCGCG
GGATTCGAGT TTCCGCGACA GATCCCGATT CCCGCGGGGG CCCAAGCCTC GCCCCCGACC
GAGGGCGACA GCGACCAGCA TCTTGCGATC ATCGATCGTC AAAAAAACCT CGAATGGGGC
ATGTGGTGGG CACGGCAGGA CGAGCACGGT CGCTGGTGGA CCGGCCTCGG CGCCGTCACC
GATCTCTCGA GCTCCGGCGT AGCTCCGCCG TGGTTCGCCT CTGCGCGGGA GTTCGACTCG
CACCGGGCGC GCGCGAGCGG TTTCCCGCTG ATCGCGGGAT TGATCCTGCG CGAGGAAATC
GCCGCGGGCG AAATCCCACA CGCCCTCGTG TTTGCCTACG ATCGCTGCCG CAGCGCCTTC
TTCATTCCGC CGGCAAGCAC GGCGCAGGTC ACGCGTCCGG ATATCCAAAA CTCCAGCGGC
ATCCCGATGG GCGGCCGGAT CCAGCTCGAT CCCGCGTGGG ACGTGGAGAA CTCCGGACTC
TCGCGCAGCG GCAAGATCAT CGCCCGCGCC CTGCAGCGCT ACGGCGCCTA CTGCGGCGAC
TTCGCCGGCG CCAACGTGCT CTACGCCGAA AACTCACCCG AGGCCGTCGC CGCATGGAGT
GGCGTGCTCG ACAAGGAGGA ACTGACGCGA GTCTTCACGC CGGAGATGAT CCGCCGCCAT
TTTCGCGTGC TCGACCTGGC CGAAATCCTG CCCGGTCAGA ATCTCGAGGT GCCCGGACCT
TACGTGCTCG CCTTTTCAGT CCGCGGCGAA TCGGCCCGCG CTGAAATCGA TCATCTCACC
CGCACGATCA TCGTGTCGCG TCCAGCCGAC CGGCGCGCCG CGATGAAAGC GACCGCGACC
TGGACGACGC ATCCGCGCGA GGCCCGCGTG ACCCTCAATG GCCAACCGGC CCCGACTTCG
CCGACGATCG ATCTCACCGA TACCACCCGG CTCACGCTCA CGACGCCGGA GGGTCGGAGC
AGCACGTGGA CCATCGTGGG CCGCGAGGCG GACCGCGAAG CTGCGCGGCA GACGCCCCGA
CGCTTTTTCG CCGACGACAG TTTCTGGAAT CAGCCGATCC CCGCTGATGC GAAGATTGAT
TCACGCACCG CGCGTTGGAT CCGGCTGCTC GAGTCGGAGC CGACCGGCGA AAACTTTCTG
GTGAACAGCA AACAGTGGAC GATTCCTGTC TACGAGGTCG ATCGCTTCAC GCCGGTTCAT
CACATCGGGC TGCTCGCGAT CACGCCGGAG GAAAAGATCC GCTGGCACAC CGATCGCGCA
ACGTTTGGCC ACGGTCCGGG CTTCGACTAC GTGCCGATTC CCGCCGCCGC TTCGCCCGAT
CCGAAGGCCG ACTCGCATCT CGCCGTCGTC GATTGGGAGC GCAATCTCGT GTGGGACATG
TGGGCGTTGT CGCGCAATCT CGACGGCTCG TGGAAATCCG CGACCGGCAT GGTCTACGCC
GCAGACGGGC CGGGCGTTTT CTCGACGGAG CAGCTCGGCG TGCGCGACGG CGAAAGCGTC
CACTTTCACG GGCCCAGCCG GGCCGCCGGG GTGCCCGCGG TCGCGGGGCT GATCCGCTAT
GACGAAGTCG CCGCCGGTGA AATCCGCCAC AAGATCGCGG CCGCTTCGCG CTTCTGTGCC
TACAAGGAAT TCGTTTTTCC CGCGGCGTGG ACCGACGGTT TCACCGAGGG CGGCATTCCC
GAGGGCACCG TCATCCAGCT CGATCCCGCG CTCGATCTCT CGCAGTTCAA GCTCACGCGT
GAGGAGCGGA TCGTCTGCGT CGCACTGCAG CGTTACGGCA TGGTGCTCGT CGATATTGCC
CAGGGACAGC CGATCTATGC CGAAGGGCTT TGGGGCCATC CCGGCAAATC GTGGGACGGC
AAGCTCGATC ACGGCCCCGG CGGCATTTCA AAAATTCCGT ATCGCCATTT CCGGATGTTG
CAGGCCGGCC CGGTCACCCG CCAGGGCGAT GGCCGCTCGA AGTTCGCTCC AGTTTGGGAG
GCCCCCTGA
|
|---|
| Protein sequence | MSAPASRLVP FGTILAFALL PAARAADAPW RPFSPDSPWN QPIAPDAPAD RDSARLVDEL
ASRGPLLINI KDWSIPVYFV DADSTPKHDV GDLRPGVYGA GFEFPRQIPI PAGAQASPPT
EGDSDQHLAI IDRQKNLEWG MWWARQDEHG RWWTGLGAVT DLSSSGVAPP WFASAREFDS
HRARASGFPL IAGLILREEI AAGEIPHALV FAYDRCRSAF FIPPASTAQV TRPDIQNSSG
IPMGGRIQLD PAWDVENSGL SRSGKIIARA LQRYGAYCGD FAGANVLYAE NSPEAVAAWS
GVLDKEELTR VFTPEMIRRH FRVLDLAEIL PGQNLEVPGP YVLAFSVRGE SARAEIDHLT
RTIIVSRPAD RRAAMKATAT WTTHPREARV TLNGQPAPTS PTIDLTDTTR LTLTTPEGRS
STWTIVGREA DREAARQTPR RFFADDSFWN QPIPADAKID SRTARWIRLL ESEPTGENFL
VNSKQWTIPV YEVDRFTPVH HIGLLAITPE EKIRWHTDRA TFGHGPGFDY VPIPAAASPD
PKADSHLAVV DWERNLVWDM WALSRNLDGS WKSATGMVYA ADGPGVFSTE QLGVRDGESV
HFHGPSRAAG VPAVAGLIRY DEVAAGEIRH KIAAASRFCA YKEFVFPAAW TDGFTEGGIP
EGTVIQLDPA LDLSQFKLTR EERIVCVALQ RYGMVLVDIA QGQPIYAEGL WGHPGKSWDG
KLDHGPGGIS KIPYRHFRML QAGPVTRQGD GRSKFAPVWE AP
|
|---|
| |