| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0009 |
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| Symbol | |
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| ID | 6205913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 9872 |
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| End bp | 14572 |
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| Gene Length | 4701 bp |
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| Protein Length | 1566 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641689630 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_001816901 |
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| Protein GI | 182411835 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.765475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACGCA CAGAGCCGTT CTGGATTCTT CCCTTCCGCC GGAATGACAA ACTAAATCTC
GTGTCCGCCC GTCCCGCCAA ACCGTTTCCT TTTCGCCTCG AGTTCCCGCC CGAGCTGCCG
ATCAGCGCGC GCGCGGAGGA GATCACCGCG GCGATCCAGG CGAACGCCGT CGTGATTCTC
GCCGGCGAAA CCGGCTCCGG CAAAACGACG CAGATTCCCA AGATGTGCCT CGCCGCCGGC
CGCGGCACGC ACGGCCGGAT CGCCTGCACG CAGCCGCGCC GCGTGGCCGC GCTCTCCGTC
TCGCGCCGCG TGGCCGAGGA GATGAACGTG ACCTGGGGCC GCGAAGTCGG CTGCAAGATC
CGCTTCAGCG ACGAAACCAC GCGCGATACC GTCGTGAAGT TTCTCACCGA CGGCATGCTC
CTCGCCGAGG TCCAGGGCGA TCCGCTGCTG CGCGACTACG ACACCATCAT CATCGACGAG
GCGCATGAGC GCTCACTCAA CATCGACTTC CTGCTCGGGC ACCTCCGCAC GCTGCGCTAC
AAGCGCCCAG AACTGAAGAT CGTCATCACC TCCGCGACAA TCGACACCGA GGCGTTCAGC
AAGGCGTTTG ACGACGCTCC GATCATTCAG GTGGAGGGCC GCATGTTTCC GGTCGAAGTC
ATCTACGCGC CGCTCGACGA ACTCGGCTCC GACTACGACG AGAACGATGA AAACACCGAG
AAATCCGACG CCTCTGCCGT CGCCTCGGCG AAGGCGGAGG CACTGCATTA CATCGACGGC
ACGGTCGAGG CCGTGGAACG CATCATTGGC GAGAGCAGCA GCGGCGACAT TCTCGTGTTT
CTGCCGAGCG AGCGCGACAT CCGCGAGGTC CGCGAGCTGC TGGAGGGGCG CTCCCTCGGT
CGCAGCGAAC TGGTGCCGCT CTTCGGCCGG CTCTCCAACG CCGAGCAGCA GCGTGTCTTC
GCGCCGACGC AGCATCGGAA AATCATTCTC GCGACCAACA TCGCGGAAAC GTCGCTGACG
ATCCCCGGCA TCCATTTCGT CGTCGATACC GGTCTTGCCC GGATCAGCCG CTACGCCCCG
CAAGCCCGCA CGCGCCGGCT GCCGATCGAG CCGGTCTCGC AATCCAGCGC CGACCAGCGC
AAAGGCCGCA GCGGCCGCGT CGCCCACGGC GTGTGCATTC GACTCTACTC CGAAAAGGAT
TACCTGGAGC GACCGCGCTT CACGCAGCCG GAAATCCAGC GCGCCAACCT CGCCGATGTC
ATTCTGCGGA TGAAAGCCTT CGGGCTGGGT GACATCGAAC GGTTCCCGTT CATCAACATG
CCGGCGACGA AGTCGATTCG CGCCGGCTAC GCGCTGCTCG AGGAACTCGG CGCGCTCGAT
TGTAGGGCGG GGTCTCCCGA CCCGGCCGTT GGAGCCATGC TGCTTCGTGG AGCCGCGACG
CCCCCGTCGC GGCCGGCTTC GACCGCGGCA ACCATGCGCG ACGAGGGCAT CGCGCCTCCA
TTTCCCTCCG ATCCCTCCGC TCCCGACTCT CAACTCTCAA CTCTCAGCTC TCAACCTTCG
CCCTACTCCC GACCCCTCAC GCCCGTCGGC CGCGAGCTCG CGCGGCTGCC CGTCGACCCC
ACCGTCGGCC GGATGATTCT CCAGGCGCGC ACCGAACGCG CGCTCCGCGA GGTGCTGGTG
ATTGCCTCCG GCCTGTCGGT GCAGGATCCG CGCGAGCGTC CGCTCGATAA ACAGCAGCAG
GCCGACACCG CGCACCGTCG GTTCCGTCAT CCCGACTCCG ACTTTCTCAC GCTGCTCAAC
ATCTGGGACG CGTACCACGA CGAGTTCGAG CGCCTCTCGC AGGCGAAGCT GCGTCGTTTC
TGCCGCGAGC ATTTTCTCAG TTACACCCGG ATGCGGGAGT GGCGCGACAT CCACGCGCAG
CTGCTCGACG TGCTGGAGGA GCGTCGCGAT TTCCAGCTGA CGTCCGTGGC CGAGCTAGCC
CGTGGCACGG GCGTCCCGCC CGTGAGTCCG AAACGAGGTT CCCCTCGGCA TCCGGCGTCT
GCTTCTCCCG CTGGGGCGTC GCTTGCCGAC GCCCGCAACC GCCGGCAAAC AGCACCGCGC
GTGAAGTCGG AAAGCCAGGC CGACGATCCG CTTGCTTTCG GCACGCCCGC TTACCGCGCG
ATTCATCGCA GCATCCTCGC CGGACTGCTC GGCAACGTCG CCACGCTCGA CGAGGAAAAC
GGCAACTACA AGGCGACGCA CGATCGCCGC GTGAACCTTT TCCCCGGCTC GGTCCTCTTT
CAGCGCGAGT CGCCCCGCAA AAAACCTCTC AACGCTCAAC CCTCAACTCT CAACTCCAGC
GCGGCGCGCG GTCGCGCGCC GCGCTGGATC ATGGCCGCCG AGATCATGGA AACCTCGCGG
CTCTACGCGC GCACCTGCGC CCGGCTCGAT CCCGCGTGGC TGCTCGAACT CGCCGGGCAT
CTCGTGCGCG TCACGCACAG TGAACCGTTC TGGAACCCGG ACGCCGGCCG CGTCATGGTG
AAGCAGCGCA CCCGGCTCTA CGGCCTCGAA ATCGACAGCC GCGCCGTCGG CTACGGTCGC
ATCAATCCCA CGCATGCCAC CGAGATTTTC ATCCGTGAGG CGCTGGTGAA CGACACGCTC
ACGCGGCAGA TCGATTTCCT GGAGCACAAC CGACGAATTC GCGAAAACAT CGAAGCGATC
CTCACGCGTA CCCGCGACAC CGGTTATCTC AACCTCGACG AAGCCGCCTG CCGTTTTTAC
GCCTCGCGCC TGATTGATGT AGGGGCGCCG CCTGCCAACG CCCCTAGTTC CTCGGCCATC
GCCGATGGGG CCGCGACGCC CTCGTCGCGG CCGGATGCTG CTCCCGATGG AGTCGCAACG
CCGCGCCCGT CCGAAGTCGA AAATCAGAAA TCGAAAATCG AAAATTCGAT CTCCTCGGTG
GGCGACTTGC TTGCGCTCCT GCGCGAACGC CGCGCCATGG AACCGCGTTT CCTGTTCATG
CAGCCCGAGG ATCTGCGCGA TCCCGACACG CTCGAGCACG ATCCCGAAGC TTTTCCCGAA
ACGCTCCCGC TCGAGAATCG CGCGCTGCCG CTCAACTACG CCTACAAACC CGGCCAGGCG
GAAGATGGCG TCACGCTCGA GCTCAACGTC CGCGAAGCCG AGGCGCTCAC GCCCGCCGCG
CTCGATTGGG CCGTGCCCGG CTACCTCGAG CCCAAGGTCG AACACTACCT GCGCGCATTG
CCGAAGGAGC TCCGCCGCGG CTTCGTGCCG CTGGCGGAAA CCGCGCGCGC CCTCGTCGCA
CAACTGGCCG AACGCGACCG GCTCACCGGC CGCCGCGAGA CCTTGACCGA AGCGCTCGCG
TTTCTGATCT CCGAACGCTT CCGCGTCGCC ATCGATTCGG CGCTCTGGGC CGACAAACCA
CCGCCCGATC ACCTGCGCGT GCGCGTACGC GTGCTCGACG ACGAAGAGCG CGAGCTTTGT
GCCAGCCGCA ACCTCGACGA GATCCAAGCT GCGTTGCACA CCCAGAAACG TGAGGCCAGC
GCCGCCGTTG CGCACGCCGA GCCCGTCGCC TGGCGCCAGG CGCGTGCCCG TTGGGAAAAG
CCGCCGCAAA CCGAATGGAC CTTCGGCGAG ATTCCCGCGC GCGTGCTGGT CACCGAACAA
GCCGGCGTGC CGGTGTTCGC CTTCCCCGCG CTGCAACCGG AAACTGGAGA CAAGCACGCG
GTAGGGCCGG CGCTTGCCGC CGGCCGTTAT CGCGGCGTCG CCTTGCGGCT CTTCAAGACA
CCAGAAGAAG CCGGCGCGGC GATGCTTCAC GGACTCTCGA CGCTGCTTGA GCTGCAGCTC
AGCCGCGATC TCGGCTGGCT CGAGCGCGAT CTCCGCGCGC TGCGCCCGCT CGGACCGCTG
GCGGCAACGC TGACGCCGCT CGAGTCGCTG CAAGCCGACG CTTTCGCCAT GCTCCGCCGC
TGGTTGATCG ACCCGGAACG CTGTAGGGCG GGATCTCCTG ATTCCGCCGC AGCCAAGGCT
TCGGACGAAC GGCGGGGTGC CGAGCCCCCG CCCTATAACA AACCCGCGTT CGCCGCCGCC
GTCGCGCGGG CCAAGTCCGA TCTGCAGGGT CTGATCCCGC GCCTCAGCGA TCTGCTCCGC
GAGATCCTCA CGCTGCGCCA ATCGCTGCTG GTTCATCCCA CGCCCTACCC GAAGCTCGAT
CAGGATCTCG CCGCGCTGCT CCCGCCAGAT TTCCCGCGGC ACACGCCCTA TTCTCAGCTC
GCCCATTTTC CCCGCTATCT GAAGGCCATG ACGCTGCGCG CCGATCGCTG GCGGAAAAAT
CCCGCCAAGG ACGCCGAGCG CGCCGCGCAG CTCGCGCCTT ATGTGGCCGC GCTCGTGAAG
CTCTCGCGAG CCCGCACCAC TCCTGCAGCC GCGACGCCCT CGTCGGGGTC CGCGGACGTA
AATCGCCTCG AATCCTTCCG TTGGCTCATC GAAGAATTCC GGGTGAGTCT CTTCGCGCAG
GAACTCGGCA CGGCTGAGCC GGTTTCGGCC GTCAAACTCG ACCGCGCACT GGCCGAGCTT
ACCGGTCAAC CGCCAGCTCG CCGCGATGAA CCGCCCCGTG GCGCCGATAC GCCTGCGATC
CGTCCGATGA CCGTCGCCAC CGACAAGAAA CTCCCACCGA TCAAGACTCT GGGCGCGCTC
GACCGGCTGT TCACCAAATA G
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| Protein sequence | MSRTEPFWIL PFRRNDKLNL VSARPAKPFP FRLEFPPELP ISARAEEITA AIQANAVVIL
AGETGSGKTT QIPKMCLAAG RGTHGRIACT QPRRVAALSV SRRVAEEMNV TWGREVGCKI
RFSDETTRDT VVKFLTDGML LAEVQGDPLL RDYDTIIIDE AHERSLNIDF LLGHLRTLRY
KRPELKIVIT SATIDTEAFS KAFDDAPIIQ VEGRMFPVEV IYAPLDELGS DYDENDENTE
KSDASAVASA KAEALHYIDG TVEAVERIIG ESSSGDILVF LPSERDIREV RELLEGRSLG
RSELVPLFGR LSNAEQQRVF APTQHRKIIL ATNIAETSLT IPGIHFVVDT GLARISRYAP
QARTRRLPIE PVSQSSADQR KGRSGRVAHG VCIRLYSEKD YLERPRFTQP EIQRANLADV
ILRMKAFGLG DIERFPFINM PATKSIRAGY ALLEELGALD CRAGSPDPAV GAMLLRGAAT
PPSRPASTAA TMRDEGIAPP FPSDPSAPDS QLSTLSSQPS PYSRPLTPVG RELARLPVDP
TVGRMILQAR TERALREVLV IASGLSVQDP RERPLDKQQQ ADTAHRRFRH PDSDFLTLLN
IWDAYHDEFE RLSQAKLRRF CREHFLSYTR MREWRDIHAQ LLDVLEERRD FQLTSVAELA
RGTGVPPVSP KRGSPRHPAS ASPAGASLAD ARNRRQTAPR VKSESQADDP LAFGTPAYRA
IHRSILAGLL GNVATLDEEN GNYKATHDRR VNLFPGSVLF QRESPRKKPL NAQPSTLNSS
AARGRAPRWI MAAEIMETSR LYARTCARLD PAWLLELAGH LVRVTHSEPF WNPDAGRVMV
KQRTRLYGLE IDSRAVGYGR INPTHATEIF IREALVNDTL TRQIDFLEHN RRIRENIEAI
LTRTRDTGYL NLDEAACRFY ASRLIDVGAP PANAPSSSAI ADGAATPSSR PDAAPDGVAT
PRPSEVENQK SKIENSISSV GDLLALLRER RAMEPRFLFM QPEDLRDPDT LEHDPEAFPE
TLPLENRALP LNYAYKPGQA EDGVTLELNV REAEALTPAA LDWAVPGYLE PKVEHYLRAL
PKELRRGFVP LAETARALVA QLAERDRLTG RRETLTEALA FLISERFRVA IDSALWADKP
PPDHLRVRVR VLDDEERELC ASRNLDEIQA ALHTQKREAS AAVAHAEPVA WRQARARWEK
PPQTEWTFGE IPARVLVTEQ AGVPVFAFPA LQPETGDKHA VGPALAAGRY RGVALRLFKT
PEEAGAAMLH GLSTLLELQL SRDLGWLERD LRALRPLGPL AATLTPLESL QADAFAMLRR
WLIDPERCRA GSPDSAAAKA SDERRGAEPP PYNKPAFAAA VARAKSDLQG LIPRLSDLLR
EILTLRQSLL VHPTPYPKLD QDLAALLPPD FPRHTPYSQL AHFPRYLKAM TLRADRWRKN
PAKDAERAAQ LAPYVAALVK LSRARTTPAA ATPSSGSADV NRLESFRWLI EEFRVSLFAQ
ELGTAEPVSA VKLDRALAEL TGQPPARRDE PPRGADTPAI RPMTVATDKK LPPIKTLGAL
DRLFTK
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