Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5548 |
Symbol | |
ID | 6182347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 44470 |
End bp | 45570 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641688680 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001815544 |
Protein GI | 172064832 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.893001 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGCA GTGCGCTCTT GAAACCGACG GCCTCCGGCC CCGCGTCGCT GCCGGACGCC CCGCCCGCCC ACGTGTCGCG CGAGAAGCGC TTCTCGCCAG CCAAGCTGGC CGTGCTCGTC GGCGTCGCCC GGGAACTCGG CCTCGATCCG GCCGCGGTGC TCGACGGCAC CGGCCTGTCG CCGGACGCCG TCACCGATCC GTTCACGCTC ACGTCGTCGC GGCAGTTCCT GAGCGCCGCG CGCAATGCGC TCGACCGCTA CGACGGCACC GATCTCGGCG TGCGCGTCGG CCGCCGGCTG CATGCGTCGA GCTACGGGAT GTACGGCTAC GCGATGCTGT GCTCGGAATC GCTCGCGCAT GCATTCGATT CGGCCGTCAA ATATCACCAG CTCGCGAACG GGATGCTCGC GATCCGCTGG GTCGAACAGG GCGACACCGC GTCGTGGCTG TTCCCGGATC CGCACGAAGC CGCGCTGCCC GAGCCCGACT TGCCGCTGTA CCGCTTCCTG ATCGACATGC AGTTCGCGCT GCACGTGACG GTCATCAAGG ACGTGATGGG TGCGTGGTGC GTGCCCGCCC GCGCGCAGTT CGCTCAGCCG GAGCCGGCGC ACGCGGCGCA GCTCGCCGAC GCGCTCGAAT GCCCGATCGC GTTCGACCAG CCGCACCATG TGTTGAGCTA CCCGGCCGCG TGGCTCGCAC GCGCGCCGCA GCTCGCGAAC CCGATCACCG CCGCGCAGGT GTCGTCGCAC TGCGCGCGCC TGCTCGACGA ACTGCGCAGC CAGGCCGGCG TCACGCGCCG CGTGTACCAG GAACTCACGC GCACGCCCGG GCAGTTCCCG GACATCGACG CGATCGCCGA CACGCTGTGC ATGACGTCGC GCACGCTGCG CCGCAAGCTC GATGCCGAAG GCACGTCGTA CAGCGAGCTG CTGACGAGCG TGCGCAAGGC GCTCGCGATC GACTACCTGA GCACCACGAC GCTCAGCACC GAGGACATCG CGCTGACGCT CGGCTTCAGC GATGCGGTCG GGTTCCGCCA CGCGTTCAAG CGCTGGACCG GCACGACGCC GAGCGACGTC CGGCGCAAGC GCGGCCGGTA A
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Protein sequence | MPRSALLKPT ASGPASLPDA PPAHVSREKR FSPAKLAVLV GVARELGLDP AAVLDGTGLS PDAVTDPFTL TSSRQFLSAA RNALDRYDGT DLGVRVGRRL HASSYGMYGY AMLCSESLAH AFDSAVKYHQ LANGMLAIRW VEQGDTASWL FPDPHEAALP EPDLPLYRFL IDMQFALHVT VIKDVMGAWC VPARAQFAQP EPAHAAQLAD ALECPIAFDQ PHHVLSYPAA WLARAPQLAN PITAAQVSSH CARLLDELRS QAGVTRRVYQ ELTRTPGQFP DIDAIADTLC MTSRTLRRKL DAEGTSYSEL LTSVRKALAI DYLSTTTLST EDIALTLGFS DAVGFRHAFK RWTGTTPSDV RRKRGR
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