| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6584 |
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| Symbol | |
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| ID | 6181808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | - |
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| Start bp | 75296 |
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| End bp | 77992 |
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| Gene Length | 2697 bp |
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| Protein Length | 898 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641685351 |
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| Product | YadA domain-containing protein |
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| Protein accession | YP_001812256 |
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| Protein GI | 172064606 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGAAAC CTTTTATTGG GACATTAAGA GTGAACCGCG CACATCGGAC GATCTGGAAC
GAAGCCCTCG GCGCATGGGT CGCCGCGTCG GAACTCGATT CTGCACGGGG CAAGAGCAAA
CGCTCGGCAT CGGTCAAGTT GCTCGTCAGC TTGTTGCTGG CTGGCGCCGC CCAGGCCAGC
TACGCAGGTC TTTACACGTT TAGCGGAGGT AACGGAGGAG CCAGTTGCGG CTACGCCGCC
AATACCGGCC CCGACGGCGT GCGCTCGTAT GCTGCCGGCA CGAATCCTCG GGACGGCAGC
GGCGGCTACT CGTCGGTTGC CGGCTGTAAT GCGAACGGCA ACAACCTGGA CGGCGTCACC
CTGTTCGGCT CGTATACGAC GGCTTCGGGC AACGGGGCCG TGGCTATCGG CATGGGCGCC
TATGCTGCAC AGCTGGCAAC CGCCAACGGT CTCCAGGCAA CGGCCTCGGG GCAATCGAGC
ACCGCACTGG GCTACAACGC ATCGGCAGGC GGCACCGGCT CCGTGGCGCT GGGCGCCAAC
GCCGCGACGG CAGCGGACGG TTCGATCGCA ATCGGTACGG GCGCTATGAC CACGGGCGGT
TCGCAGGACA TCAACTCGAT TGCGCTCGGC AACGGCGCAA CTGCCTCGGG CGGCAGCTCG
ATTGCGCTGG GTTCGGGCGC AACCTCCACC GTCGCCAATT CGGTCGCCAT CGGCGCGGGG
TCCACTGCAA GTGGCAATGC ATCCGGTACG ACCGGTGGCA CCGGCACCGT CAGCAGCACG
ATCAACGGTC AGTCGTTCGG CACCTTTGCC GCATCGTCAT CGACCGCCGG TGTTGTGAGC
GTCGGCAAAG TCGGTTCGGA ACGTCGTATC CAGAACGTCG CGGCAGGGCT CGTCAGCAGT
ACCAGCACTG ACGCAATCAA CGGCAGCCAG CTCTACGCCG TGGCAAGCAC GACGACGTCG
AGCATCACCA GCCTGTCGAC GTCTGCGTCG ACGGGTCTGT CCTCGGCCAA CAGCTCGATC
ACCTCGCTGT CCACGTCGAC CTCGACCGCG ATCAACACCG CAAAGACGCA CTACTACAGT
GTCAACGACA ACGGCGTGCA GCAAAGCAAC TACGCCAACG ACGGCGCGAC GGGCACCAAC
GCCCTCGCGG CCGGCGTGAA CGCCAGCGCG GCGGGCGCAA GCAGCGTCGC GGTCGGCGAC
GGCTCGAACG CACAGTCGGC AGGCGCGGTC GCAATCGGCC AGAACGCATC GGCAACGGGC
GGCAAGGCCG TGTCGATCGG CTCCGGCAAC ACCGCGACCG GCGACGGCGC GGTCGCGATC
GGCGACCCGA GCATCGCGAC GGGCACCGGC GCGGTGGCGA TGGGCGCGAA CGACACGGCG
ACCGGCAACG GCGCAGTGGC GCTCGGCAAC GCGAACACGG CAAACGGCGC CGGCGCGCTC
GCCCTCGGCA ACTCGAACCA GGCCACCGCG GACAACACGA TCGCGCTGGG CAACCAGTCC
ACGGCCAGCG CCACCGGCGC ACAGGCCTAC GGCTCGGCTG CCAAGGCCAC GGCCGCCGAC
GCGCTCGCCT TCGGCACGAA CGCGCAAGCC AACGTCGCCA ACTCGATCGC ACTCGGCGCG
AACTCGGTCA CGAGTGCCGC GAACCCGACG TCGAGCGCCA CGATCGGCGG CGTCACGTAC
TTCTCCGCGG GCAGCTCGCC GGTCGGCGTG GTGAGCGTCG GCGCACCGGG CCAGGAACGC
CAGATCACGA ACGTCGCCGC GGGCCGGATC TCGGCCACCA GCACGGACGC GATCAACGGC
AGCCAGCTCA ATGCGACGAA CAACGCGGTC AACGCGCTGT CGACGTCCAC TGCGTCGAAC
GTCGCGTCGC TGTCGACCGG CATCGGCTCG CTGTCGACCG GCCTGAGCAC GACGAACAGC
AACGTGGCCT CGCTGTCCAC GTCGACCTCG ACCGCGATCA ACTCGCTGTC GACGGGCCTG
AGCGCGACGA ACAGCAACGT GAACTCGCTG TCGACGTCGA CCTCGACGGG CATCGGTTCG
CTGTCCACCG GCCTGAGCAC GACGAACAGC AACGTGGCGT CGCTGTCGAC CGGCGTGACG
AACATCAACA ACACGCTGAA CCAGTTGTCG ACGTCGATCA ACAACAACAC GACGCGGGCG
GCGAACAACA ACGGCATCGC GGCCGACATG AACGGTACGG GCAGCGATGC GCCGAAGATC
ACTGCCGGCT CGAGCTCGGT GGCGATCGGC GCGAATTCGA CGGACGGCGG CCGCCAGAAC
GTGGTGTCGG TCGGCAGCGA CACGCAGCAG CGCCAGATCG TCAACGTCGC GCCGGGTACG
CAAGGCACCG ACGCCGTGAA CCTTCAGCAG CTCAACTCCG GGATGAACAA CACGCTGAAT
CAGGCAAACA ACTACACGAA CAGCCAGGTT CAGAACCTCC AGAACAATAT CGATTCAGTG
CGGAAAGATG CGGATGGCGG GGCGGCGGCT GCGATGGCGG TTGCGGGCCT GCCTCAACCG
ACGCGCCCCG GGATGAACAT GGTAGCGCTG GCCGGCAGTG TCTATCGCGG TCAATCCGGT
CAGGCGCTGG GGCTGTCCCG AATCTCGGAG AACGGGCACT GGGTGTACAA GGGCGCCGTT
ACCACGAACA CGCGAGGCAC ATATGGTGTC GTCGTGGGCG GCGGGTACCA ATGGTAA
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| Protein sequence | MLKPFIGTLR VNRAHRTIWN EALGAWVAAS ELDSARGKSK RSASVKLLVS LLLAGAAQAS
YAGLYTFSGG NGGASCGYAA NTGPDGVRSY AAGTNPRDGS GGYSSVAGCN ANGNNLDGVT
LFGSYTTASG NGAVAIGMGA YAAQLATANG LQATASGQSS TALGYNASAG GTGSVALGAN
AATAADGSIA IGTGAMTTGG SQDINSIALG NGATASGGSS IALGSGATST VANSVAIGAG
STASGNASGT TGGTGTVSST INGQSFGTFA ASSSTAGVVS VGKVGSERRI QNVAAGLVSS
TSTDAINGSQ LYAVASTTTS SITSLSTSAS TGLSSANSSI TSLSTSTSTA INTAKTHYYS
VNDNGVQQSN YANDGATGTN ALAAGVNASA AGASSVAVGD GSNAQSAGAV AIGQNASATG
GKAVSIGSGN TATGDGAVAI GDPSIATGTG AVAMGANDTA TGNGAVALGN ANTANGAGAL
ALGNSNQATA DNTIALGNQS TASATGAQAY GSAAKATAAD ALAFGTNAQA NVANSIALGA
NSVTSAANPT SSATIGGVTY FSAGSSPVGV VSVGAPGQER QITNVAAGRI SATSTDAING
SQLNATNNAV NALSTSTASN VASLSTGIGS LSTGLSTTNS NVASLSTSTS TAINSLSTGL
SATNSNVNSL STSTSTGIGS LSTGLSTTNS NVASLSTGVT NINNTLNQLS TSINNNTTRA
ANNNGIAADM NGTGSDAPKI TAGSSSVAIG ANSTDGGRQN VVSVGSDTQQ RQIVNVAPGT
QGTDAVNLQQ LNSGMNNTLN QANNYTNSQV QNLQNNIDSV RKDADGGAAA AMAVAGLPQP
TRPGMNMVAL AGSVYRGQSG QALGLSRISE NGHWVYKGAV TTNTRGTYGV VVGGGYQW
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