Gene BamMC406_5285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5285 
Symbol 
ID6180570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2504759 
End bp2505496 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content59% 
IMG OID641685040 
ProductOmpW family protein 
Protein accessionYP_001811945 
Protein GI172064294 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCA GGTGGACGAC GAGTTTCGCA GGCGTGGCGA TTTGTATCTG CTCGCCTTTG 
CTTGTCGACG ATGTGCAGGC ACAGACGGCC GGAAGCATTA CGACATCGGT AGGATGGCTA
CACATCGCCC CGCAGGGCAG CGCAACGCCC CTGGTCGTGC AAAGTGTCGG CGGCGTCACG
GTGAATCAGG AACTGACCGG TAGCAGCGCA CATGCCAGTT CGACAGATAC GCTCGGCATT
ACCAACGAGT ACTACGTCAC CGACAACTTC GGCGTCGCGA TGCTTTTTGG CATGCCGCTG
AAGGTCAATC TGATTGGCGA CGGGACGTTG CAGAAGTACG GCACGCTCGG CACGACAAGG
CCGATGCCGC CCGCGATCGA ACTTCGATAC CACCTGTTTT CTGCCACATC AAAATTCCGG
CCGTTCCTGG GCATTGGCGC GAACTATACG TGGTTCACCC AGGTTCGAGC CACCAACAGC
CGGTTCGTCT CCGACAGCTT CGGCCCGGGC GGCTCGGCGC ACGCGACACT CAGCGCTTCG
TGGAACCCCG TGTTCGAGAT CGGCGCGAAT TACGCGGTGA CAAGACACTG GTCTGTCGGA
ACCTCCGTCA GCTACATGCC GGTGAAAACC CACCTCACGT TATACGGACA GACCGCGACC
GGGACGCAGA TCGTTTCCAA ATCGACGCTC CGGCTCAATC CCGTCAGCGT TTTCCTGAAC
GTCGCCTATA CGTTCTGA
 
Protein sequence
MNFRWTTSFA GVAICICSPL LVDDVQAQTA GSITTSVGWL HIAPQGSATP LVVQSVGGVT 
VNQELTGSSA HASSTDTLGI TNEYYVTDNF GVAMLFGMPL KVNLIGDGTL QKYGTLGTTR
PMPPAIELRY HLFSATSKFR PFLGIGANYT WFTQVRATNS RFVSDSFGPG GSAHATLSAS
WNPVFEIGAN YAVTRHWSVG TSVSYMPVKT HLTLYGQTAT GTQIVSKSTL RLNPVSVFLN
VAYTF