| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5005 |
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| Symbol | |
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| ID | 6179895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2159735 |
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| End bp | 2161945 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641684757 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001811667 |
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| Protein GI | 172064016 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACA GGACCCCGTT CGCGAGCGCG CTCGCGCTGG CCTTTGCTTT GCCTATCGCT
TCGCCCGCAC TCGCTCAGAA CACGAGCGCC GAACCGTCGC CGGCCGCCAC CGCGAAACCG
GGCGACGCGC CGCCGACCGC CGCCGCCACC GCCGCGCGCG ATACGCTGCC GACGATCAGC
GTGTCGGGTC AGGCCGTGCA ACAGGACTTC CAGGCCGAGC GCTCGAGCGT CGGCGCGAAA
ACCCCGACCG CGTTGCGCGA CATTCCGCAG TCGGTCACGG TGATCAACAA GGCGCTGATG
GAGTCGCAAG GACTCACGTC GTTCCAGGAC GCGCTGCGCA ATGCGCCGGG CATCACGATC
GGCGGCGCGG AAGGCGGGCA GATCGGCAAC AACATCAACC TGCGCGGCTT CACCGCGCAG
AACGACATCT ATCTCGACGG CTTTCGCGAC CGCAACCAGT ACTACCGCGA CACGTTCGAC
CTCGATTCGG TCGAGGTGCT GTACGGCCCG TCGTCGATGC TGTTCGGGCG CGGTTCGACG
GGCGGCGTCA TCAACCAGGT ATCGAAGAAG GCGAACCTGA AGCCGTCGGC CGAGGTGTCG
ACGACGATCG GCACCGACGA TCGCTACCGC ACGAGCGTCG ACCTGAACCG GCCGCTCGGC
GCGACGTCGG CGTTCCGCAT CAACGCATTC GGCCAGTCGC TCGGCTCGAC GCGCGACGTG
ATGAAGAACA AGGACTACGG GATCGCACCG GAACTGCGCT TCGGGATCGG CACGCCGACC
GAGGTGACGC TGTCCGCGCT GATCCAGCAC AACTACGACA TGCCCGACTA CGGCGTGCTC
GCGGTCAACG GCCATCCGGC GCCAGTACCG AAGAACACCT TCTATGGCCT CACCGACGAT
CGCACGATCC AGGACGTGCA GACCGTGTCC GCACGCATCG ATCATCGCGT CAACGATGCG
CTGACCATCA GCAACCGCAC GTCGTTCTCG CACTCGATGA CCGATGCGCG GGAGACGGCG
GCGAACGCGG TGCTGACCGG GCCGCTGTCG TCGAGCGCCG CGCTGACGAA CGGCAACTAC
ACGTCGTTGC CGATGTCCGC GCTGTACGTG AGGCTCGCGA GCCACGACCG CGTGATCGAA
AACCATTCGG TCGACAACGA CACGATGGCG CATTTCAAGT TCGACACGGG CTTCGTGAAG
CACGACCTGA TCGCCGGTGT CGAGGTCGGC CACGACAGCT ACGCGAACCA GGCGTACACG
CGCAGCGGTC TGCCGATCCT GTCGCTGATC GACCCGGCCT ACCTGGCGTC GACGCCGACC
AACGCGACAC AGACGCCGGC CAACCACGCC GAATCGGGCG CGACCACGCT CGCGGCGTAC
CTGAACGACA CGGTGTCGAT CGGCCGCGAC TGGAAATTCG TCGGCGGGCT GCGCTGGGAT
CGCTTCCAGG CGCATCTCGC GAACACGGTG AGCGCGCCCC GCTACGCGTC GCAGACGAAC
TATTTCACGA GCGTGCGGGC CGGCGTGATC TACCAGCCGA CCGAATCGCA GTCGTACTAC
TTCTCGTACG GCACGTCGTT CAACCCGTCG CTCGAGACGC TGACGGTCAC GAACAACACG
CAGAACCTGT CGCCCGAACA CACGAAGTCG TACGAGGTCG GCGGCAAGTG GGATCTGCTC
AACGACAACC TGTCGGTCAC GTCGGCGCTG TTCCAGCAGG AGAAGAGCAA CGCGCGCACG
CAGACGTCGA CGGGTGAATA CCTGCTCGAA GGCGACGTTC GCGTGCGCGG CTTCCAGGCG
AGCGTGACGG GCCACATCAC GCCGAAGTGG CAGGTGTTCG GCAGCTACAC GTACATGAAC
GGCGTGATCC TGAGCGCGCG CGACGGCACG CAGGGCAAGG CGCTCGCGAA CACGCCGCGC
AACACCTTCA CGCTGTGGAC CACGTATGCG TTCACGCCGC ACTGGGAGAT CGGCGGCGGC
CCGACATACA TGTCGGGACG CTACGCGGCG AACACGGACT ACGTGCAGGT TGGCGGCTAC
ACGCGCTGGG ATGCGACGGC CGCGTATCAC GCGAAGCAGT GGGACCTGCG CCTGAACCTG
CTGAACCTGA CCAACAAGTT CTATTACGAT GCGCTGATCC AGTCGGACGG CGGCCGTGCG
GTGCCGGGCG TCGGGCGCAC GTTCCTCGCG ACGCTCGACT ACCGGTTCTG A
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| Protein sequence | MLNRTPFASA LALAFALPIA SPALAQNTSA EPSPAATAKP GDAPPTAAAT AARDTLPTIS
VSGQAVQQDF QAERSSVGAK TPTALRDIPQ SVTVINKALM ESQGLTSFQD ALRNAPGITI
GGAEGGQIGN NINLRGFTAQ NDIYLDGFRD RNQYYRDTFD LDSVEVLYGP SSMLFGRGST
GGVINQVSKK ANLKPSAEVS TTIGTDDRYR TSVDLNRPLG ATSAFRINAF GQSLGSTRDV
MKNKDYGIAP ELRFGIGTPT EVTLSALIQH NYDMPDYGVL AVNGHPAPVP KNTFYGLTDD
RTIQDVQTVS ARIDHRVNDA LTISNRTSFS HSMTDARETA ANAVLTGPLS SSAALTNGNY
TSLPMSALYV RLASHDRVIE NHSVDNDTMA HFKFDTGFVK HDLIAGVEVG HDSYANQAYT
RSGLPILSLI DPAYLASTPT NATQTPANHA ESGATTLAAY LNDTVSIGRD WKFVGGLRWD
RFQAHLANTV SAPRYASQTN YFTSVRAGVI YQPTESQSYY FSYGTSFNPS LETLTVTNNT
QNLSPEHTKS YEVGGKWDLL NDNLSVTSAL FQQEKSNART QTSTGEYLLE GDVRVRGFQA
SVTGHITPKW QVFGSYTYMN GVILSARDGT QGKALANTPR NTFTLWTTYA FTPHWEIGGG
PTYMSGRYAA NTDYVQVGGY TRWDATAAYH AKQWDLRLNL LNLTNKFYYD ALIQSDGGRA
VPGVGRTFLA TLDYRF
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